DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6508 and ctsd

DIOPT Version :10

Sequence 1:NP_609457.1 Gene:CG6508 / 34493 FlyBaseID:FBgn0032303 Length:423 Species:Drosophila melanogaster
Sequence 2:NP_988964.1 Gene:ctsd / 394561 XenbaseID:XB-GENE-5906945 Length:398 Species:Xenopus tropicalis


Alignment Length:396 Identity:163/396 - (41%)
Similarity:232/396 - (58%) Gaps:21/396 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEVG-QLIIIPLFLLLLDHSMGQLRRTPITRQINQNKTHANVKAEKILLAAKYFLVDRQSSQTTQ 64
            |:.| .|:.|||           .:.|.|.|.:::....| :|......|.||.......:.|.:
 Frog    16 MQPGSSLVRIPL-----------KKFTSIRRAMSETDQDA-LKLSGNEAATKYSAFLNSKNPTPE 68

  Fly    65 VLANGFNLEYTIRLCIGTPPQCFNLQFDTGSSDLWVPSVKCSSTNEACQKHNKYNSSASSSHVED 129
            .|.|..:.:|...:.||||||.|.:.||||||:|||||:.||..:.||..|:||:||.|::::.:
 Frog    69 TLLNYLDAQYYGEIGIGTPPQPFTVVFDTGSSNLWVPSIHCSFWDLACWLHHKYDSSKSTTYINN 133

  Fly   130 GKGFSIQYGSGSLSGFLSTDTVDIDGMVIRNQTFAEAIDEPGSAFVNTIFDGIIGMAFASIS-GG 193
            |..|:||||||||:|:||.|||.|..:.:..|.|||||.:||..||...||||:||.:..|| .|
 Frog   134 GTEFAIQYGSGSLTGYLSKDTVTIGDLAVNGQFFAEAIKQPGITFVAAKFDGILGMGYPKISVDG 198

  Fly   194 VTTPFDNIIRQGLVKHPVFSVYLRRDGTSQSGGEVIWGGIDRSIYRGCINYVPVSMPAYWQFTAN 258
            |...||:|:.|.||...:||.||.|:..:..|||::.||.|.:.|.|..||:.|:..||||...:
 Frog   199 VPPVFDDIMEQKLVDSNIFSFYLNRNPDTLPGGELLLGGTDPAFYTGDFNYMNVTRKAYWQIHMD 263

  Fly   259 SVKI-EGILLC-NGCQAIADTGTSLIAVPLRAYKAINKVLNATDAGDGEAFVDCSSLCRLPNVNL 321
            .:.: :.:.|| :||:||.|||||||..|:....|:.:.:.|.....||..:.|.|:..||.::.
 Frog   264 QLSVGDRLSLCKDGCEAIVDTGTSLITGPVEEVTALQRAIGAIPLICGEYMILCDSIPSLPVISF 328

  Fly   322 NIGGTTYTLTPKDYIYKVQADNNQTLCLSGFTYLQ----GNLLWILGDIFLGKVYTVFDVGKERI 382
            ..||..|:||.:.|:.|: :...:|:|||||..|.    ...|||:||:|:|:.|||||...:|:
 Frog   329 TFGGRAYSLTGEQYVLKI-SKAGRTVCLSGFLGLDIPPPAGPLWIIGDVFIGQYYTVFDRANDRV 392

  Fly   383 GFAKLK 388
            ||||.|
 Frog   393 GFAKAK 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6508NP_609457.1 pepsin_retropepsin_like 68..386 CDD:472175 144/324 (44%)
ctsdNP_988964.1 A1_Propeptide 24..>39 CDD:462326 6/25 (24%)
pepsin_retropepsin_like 72..396 CDD:472175 144/324 (44%)

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