DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6508 and Pgcl

DIOPT Version :9

Sequence 1:NP_609457.1 Gene:CG6508 / 34493 FlyBaseID:FBgn0032303 Length:423 Species:Drosophila melanogaster
Sequence 2:NP_525030.1 Gene:Pgcl / 30984 FlyBaseID:FBgn0011822 Length:407 Species:Drosophila melanogaster


Alignment Length:412 Identity:161/412 - (39%)
Similarity:238/412 - (57%) Gaps:39/412 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EVGQLIIIPLFLLLLDHSMGQLRRTPITRQINQNKTHANVKAEKILLAAKYFLVDRQSSQTTQVL 66
            ::..|:.:...::|:..:...|||.||.:..|..::|.|:.||:..:..||         ..|..
  Fly     5 QIKSLVFLAGLIVLVGEANSTLRRIPIQKSPNFKRSHKNIVAERDFVQQKY---------NRQYT 60

  Fly    67 ANGF---------NLEYTIRLCIGTPPQCFNLQFDTGSSDLWVPSVKCSSTNEACQKHNKYNSSA 122
            |||:         |.:|...:.||||.|.|.:|||||||:||||...|.||  |||.|..:..:.
  Fly    61 ANGYPMEHLSNYDNFQYYGNISIGTPGQDFLVQFDTGSSNLWVPGSSCIST--ACQDHQVFYKNK 123

  Fly   123 SSSHVEDGKGFSIQYGSGSLSGFLSTDTVDIDGMVIRNQTFAEAIDEPGSAFVNTIFDGIIGMAF 187
            ||::|.:|..|||.||:||:||:||.|.|...|:.|::|||.|...|.|:.||:..||||:||.|
  Fly   124 SSTYVANGTAFSITYGTGSVSGYLSVDCVGFAGLTIQSQTFGEVTTEQGTNFVDAYFDGILGMGF 188

  Fly   188 ASIS-GGVTTPFDNIIRQGLVKHPVFSVYLRRDGT-SQSGGEVIWGGIDRSIYRGCINYVPVSMP 250
            .|:: .|||..|.|:::||||:.||||.:||.:|: :..|||:|.||.|.|:|.|.:.||.|...
  Fly   189 PSLAVDGVTPTFQNMMQQGLVQSPVFSFFLRDNGSVTFYGGELILGGSDPSLYSGSLTYVNVVQA 253

  Fly   251 AYWQFTANSVKIEGILLCNGCQAIADTGTSLIAVPLRAYKAINKVLNATDAGDGEAFVDCSSLCR 315
            |||:|..:.:|:....:....|||||||||||..|...|..|:::.||    :.|...:||| ..
  Fly   254 AYWKFQTDYIKVGSTSISTFAQAIADTGTSLIIAPQAQYDQISQLFNA----NSEGLFECSS-TS 313

  Fly   316 LPNVNLNIGGTTYTLTPKDYIYKVQADNNQTLCLSGFTYLQGNLLWILGDIFLGKVYTVFDVGKE 380
            .|::.:||.|..:.:..|.||  ::.::..:|.:...    ....||:||:|||::||.||||.:
  Fly   314 YPDLIININGVDFKIPAKYYI--IEEEDFCSLAIQSI----NQDFWIMGDVFLGRIYTEFDVGNQ 372

  Fly   381 RIGFAK------LKKHSSYRVY 396
            |:|||.      |:|...:|::
  Fly   373 RLGFAPVNSAVGLRKAVLWRIF 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6508NP_609457.1 pepsin_retropepsin_like 68..386 CDD:299705 141/328 (43%)
Asp 73..387 CDD:278455 139/321 (43%)
PgclNP_525030.1 pepsin_retropepsin_like 67..378 CDD:299705 139/323 (43%)
Asp 76..379 CDD:278455 139/315 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455560
Domainoid 1 1.000 297 1.000 Domainoid score I1463
eggNOG 1 0.900 - - E1_KOG1339
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 319 1.000 Inparanoid score I2536
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1619495at2759
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR47966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1456
98.900

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