DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6508 and asp-18

DIOPT Version :10

Sequence 1:NP_609457.1 Gene:CG6508 / 34493 FlyBaseID:FBgn0032303 Length:423 Species:Drosophila melanogaster
Sequence 2:NP_507653.2 Gene:asp-18 / 191310 WormBaseID:WBGene00013973 Length:392 Species:Caenorhabditis elegans


Alignment Length:407 Identity:139/407 - (34%)
Similarity:204/407 - (50%) Gaps:58/407 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LFLLLLDHSMGQLRRTPITRQINQNKTHANVKAEKILLAAKY--FLVDR--QSSQTTQVLANGFN 71
            |.|||:......:.:.|.|       |..:.:| |::...||  ||..|  |.:..:|.|. ||:
 Worm     3 LLLLLVTTCSAAVFQVPTT-------TSGSFRA-KLIREGKYSSFLASRLQQLNTGSQPLL-GFS 58

  Fly    72 LEYTI-RLCIGTPPQCFNLQFDTGSSDLWVPSVKCSSTNEACQ-------KHNKYNSSASSSHVE 128
            .:..| .:.||:|||...:..||.|::|||....|:|.|  |.       || |:|::.|:|.|:
 Worm    59 DDPCIGNITIGSPPQSAFVFMDTTSANLWVMGSACTSVN--CNDPLLGIIKH-KFNTTKSTSFVK 120

  Fly   129 DGKGFSIQYGSGSLSGFLSTDTVDIDGMVIRNQTF--AEAIDEPGSAFVNTIFDGIIGMAFASIS 191
            ..:.|:||||||..||:|.||||:|.|:.|:.|.|  |..:|..   |.....|||.|:|:.::|
 Worm   121 SNRKFNIQYGSGECSGYLGTDTVEIGGLKIQKQEFGVANIVDYD---FGTRPIDGIFGLAWPALS 182

  Fly   192 -GGVTTPFDNIIRQGLVKHPVFSVYLRR---DGTSQSGGEVIWGGIDRSIYRGCINYVPVSMPAY 252
             ..||.|..|::.|..:..|:|:::..:   |....|.|.:.:||:|.......|:|||||...|
 Worm   183 VDQVTPPMQNLVSQNQLDAPIFTIFFDKRDPDYYYPSNGLITYGGLDTKNCNANISYVPVSSKTY 247

  Fly   253 WQFTANSVKIEGILL------CNGCQAIADTGTSLIAVPLRAYKAINKVLNAT-DAGDGEAFVDC 310
            |||     |::|..:      .|..|||.|||:|...:|......|....||| |.......|.|
 Worm   248 WQF-----KVDGFQVGTYNRTVNRDQAIMDTGSSWFGLPYSVIAGIATQTNATWDLYASVYTVPC 307

  Fly   311 SSLCRLPNVNLNIGGTTYTLTPKDYIYKVQADNNQTLCL-------SGFTYLQGNLLWILGDIFL 368
            |::..||::...||...:.::..:|:..|..|:. |..|       |||    |..: .||:||:
 Worm   308 STMNSLPDLVFTIGAEKFPISAPEYVEDVGLDDG-TCALAMYGIDASGF----GPSV-TLGNIFI 366

  Fly   369 GKVYTVFDVGKERIGFA 385
            .:..:|||||..|||||
 Worm   367 RRYCSVFDVGNARIGFA 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6508NP_609457.1 pepsin_retropepsin_like 68..386 CDD:472175 122/346 (35%)
asp-18NP_507653.2 pepsin_like 63..383 CDD:133138 118/336 (35%)

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