DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6508 and hrg-7

DIOPT Version :9

Sequence 1:NP_609457.1 Gene:CG6508 / 34493 FlyBaseID:FBgn0032303 Length:423 Species:Drosophila melanogaster
Sequence 2:NP_001256448.1 Gene:hrg-7 / 182635 WormBaseID:WBGene00007605 Length:428 Species:Caenorhabditis elegans


Alignment Length:412 Identity:116/412 - (28%)
Similarity:186/412 - (45%) Gaps:59/412 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 RTPITRQINQNKTHANVKAEKILLAAKYFLVDRQSSQTTQVLANGFNLEYTIRLCIGTPPQCFNL 89
            |..:.:::|.....|..:.|:..|.:|..|   |.:.::..:.:..::.|.:::.:|:|.|.|.|
 Worm    26 RPNMRQRMNAKGKLAEYEKERNELLSKKSL---QLASSSSPVIDYEDMAYMVQISLGSPAQNFVL 87

  Fly    90 QFDTGSSDLWVPSVKCS--------------------------------------STNEACQKHN 116
            ..|:|||:||||.:.|:                                      ||.:|||..:
 Worm    88 FIDSGSSNLWVPDITCAGGKDATCGSYCKSTPYDACLTFCQEECCTKTVEGVKVLSTTDACQSKH 152

  Fly   117 KYNSSASSSHVEDGKGFSIQYGSGSLSGFLSTDTVDIDGMVI--RNQTFAEAIDEPGSAFVNTIF 179
            ::|||.|||:|.:|:.|.:.|.:|.:.||...||.......:  ..|.|.:| ...|.||.....
 Worm   153 RFNSSLSSSYVTNGQKFDMTYNTGEVKGFFGVDTFCFTNTSVCATGQVFGQA-TTIGEAFAKQPE 216

  Fly   180 DGIIGMAFASIS-GGVTTPFDNIIRQGLVKHPVFSVYLRRDG-TSQ-SGGEVIWGGIDRSIYRGC 241
            |||||:.:.::: ...|.|..|::.||.:..|.|.|||...| ||| :||....||:|.:.....
 Worm   217 DGIIGLGWPALAVNQQTPPLFNLMNQGKLDQPYFVVYLANIGPTSQINGGAFTVGGLDTTHCSSN 281

  Fly   242 INYVPVSMPAYWQFTANSVKIEGILLC--NGCQAIADTGTSLIAVPLRAYKAINKVLNATDAG-D 303
            :::||:|...:|||....|........  :|.||.|||..|.|..|.....::.|.:.||... .
 Worm   282 VDWVPLSTQTFWQFKLGGVSSGSYSQAPNSGWQAAADTAASFIGAPKSVVTSLAKAVGATYVPLT 346

  Fly   304 GEAFVDCSSLCRLPNVNLNIGGTTYTLTPKDYIYKVQADNNQTLCLSGFTYLQGN---LLWILGD 365
            |..|:||.::  :|::...|.|.||.:....::  |.|....  |:..|..|...   ..|:||.
 Worm   347 GAFFMDCDAV--VPDIVFTINGKTYNMPSTSFV--VSAGPGP--CMFAFYELTAGGFYPAWMLGP 405

  Fly   366 IFLGKVYTVFDVGKERIGFAKL 387
            .|:.....|.|:...|:|.||:
 Worm   406 PFMRAYCHVHDMKSGRLGLAKV 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6508NP_609457.1 pepsin_retropepsin_like 68..386 CDD:299705 106/366 (29%)
Asp 73..387 CDD:278455 107/362 (30%)
hrg-7NP_001256448.1 pepsin_retropepsin_like 71..427 CDD:416259 107/362 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54317
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR47966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.020

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