DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6508 and Ctsd

DIOPT Version :10

Sequence 1:NP_609457.1 Gene:CG6508 / 34493 FlyBaseID:FBgn0032303 Length:423 Species:Drosophila melanogaster
Sequence 2:NP_034113.1 Gene:Ctsd / 13033 MGIID:88562 Length:410 Species:Mus musculus


Alignment Length:401 Identity:164/401 - (40%)
Similarity:223/401 - (55%) Gaps:24/401 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IIPLFLLLLDHSMGQLRRTPITR--QINQNKTHANVKAEKILLAAKYFLVDRQSSQTT-----QV 65
            ::.|.|.||..|...:.|.|:.:  .|.:..|......|.::|.........|||..|     ::
Mouse     6 VLLLILGLLASSSFAIIRIPLRKFTSIRRTMTEVGGSVEDLILKGPITKYSMQSSPKTTEPVSEL 70

  Fly    66 LANGFNLEYTIRLCIGTPPQCFNLQFDTGSSDLWVPSVKCSSTNEACQKHNKYNSSASSSHVEDG 130
            |.|..:.:|...:.||||||||.:.||||||:|||||:.|...:.||..|:||||..||::|::|
Mouse    71 LKNYLDAQYYGDIGIGTPPQCFTVVFDTGSSNLWVPSIHCKILDIACWVHHKYNSDKSSTYVKNG 135

  Fly   131 KGFSIQYGSGSLSGFLSTDTVDID---------GMVIRNQTFAEAIDEPGSAFVNTIFDGIIGMA 186
            ..|.|.||||||||:||.|||.:.         |:.:..|.|.||..:||..||...||||:||.
Mouse   136 TSFDIHYGSGSLSGYLSQDTVSVPCKSDQSKARGIKVEKQIFGEATKQPGIVFVAAKFDGILGMG 200

  Fly   187 FASIS-GGVTTPFDNIIRQGLVKHPVFSVYLRRDGTSQSGGEVIWGGIDRSIYRGCINYVPVSMP 250
            :..|| ..|...|||:::|.||...:||.||.||...|.|||::.||.|...|.|.::|:.|:..
Mouse   201 YPHISVNNVLPVFDNLMQQKLVDKNIFSFYLNRDPEGQPGGELMLGGTDSKYYHGELSYLNVTRK 265

  Fly   251 AYWQFTANSVKI-EGILLC-NGCQAIADTGTSLIAVPLRAYKAINKVLNATDAGDGEAFVDCSSL 313
            ||||...:.::: ..:.|| .||:||.||||||:..|:...|.:.|.:.|.....||..:.|..:
Mouse   266 AYWQVHMDQLEVGNELTLCKGGCEAIVDTGTSLLVGPVEEVKELQKAIGAVPLIQGEYMIPCEKV 330

  Fly   314 CRLPNVNLNIGGTTYTLTPKDYIYKVQADNNQTLCLSGFTYLQ----GNLLWILGDIFLGKVYTV 374
            ..||.|.|.:||..|.|.|..||.|| :...:|:|||||..:.    ...||||||:|:|..|||
Mouse   331 SSLPTVYLKLGGKNYELHPDKYILKV-SQGGKTICLSGFMGMDIPPPSGPLWILGDVFIGSYYTV 394

  Fly   375 FDVGKERIGFA 385
            ||....|:|||
Mouse   395 FDRDNNRVGFA 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6508NP_609457.1 pepsin_retropepsin_like 68..386 CDD:472175 148/334 (44%)
CtsdNP_034113.1 A1_Propeptide 23..49 CDD:462326 5/25 (20%)
Cathepsin_D2 73..405 CDD:133157 146/332 (44%)

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