DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6508 and nots

DIOPT Version :9

Sequence 1:NP_609457.1 Gene:CG6508 / 34493 FlyBaseID:FBgn0032303 Length:423 Species:Drosophila melanogaster
Sequence 2:NP_571879.1 Gene:nots / 114367 ZFINID:ZDB-GENE-010620-1 Length:416 Species:Danio rerio


Alignment Length:410 Identity:147/410 - (35%)
Similarity:229/410 - (55%) Gaps:40/410 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IIPLFLLLLDHSMG----QLRRTPITRQINQNKTHANVKAEKILL----------------AAKY 52
            :|.:.:|.|..|.|    .||:.|..|    ::..|:.:.|:.|.                .|::
Zfish     6 LILILVLHLGFSTGLLRVALRQYPSVR----SRLRASAQLEEFLKQHQPDMFSRRYVQCFPPAQH 66

  Fly    53 FLVDRQSSQTTQVLANGFNLEYTIRLCIGTPPQCFNLQFDTGSSDLWVPSVKCSSTNEACQKHNK 117
            ||  |...:.|:.|.|..:.::..::.:|.|.|.|.:.||||||||||||..|  ..:||..|||
Zfish    67 FL--RPGRRVTERLYNFMDAQFFGQISLGRPEQNFTVVFDTGSSDLWVPSSYC--VTQACALHNK 127

  Fly   118 YNSSASSSHVEDGKGFSIQYGSGSLSGFLSTDTVDIDGMVIRNQTFAEAIDEPGSAFVNTIFDGI 182
            :.:..||::..||:.|.|.||||.|.|.::.|.:.:..:.::||.|.||:.|||.:||...|||:
Zfish   128 FKAFESSTYTHDGRVFGIHYGSGHLLGVMARDELKVGSVRVQNQVFGEAVYEPGFSFVLAQFDGV 192

  Fly   183 IGMAFASISGGVTTP-FDNIIRQGLVKHPVFSVYLRRDGTSQSGGEVIWGGIDRSIYRGCINYVP 246
            :|:.|..::....:| ||.::.|.::..||||.||..:| |..|||:::|..|.|.:...||::|
Zfish   193 LGLGFPQLAEEKGSPVFDTMMEQNMLDQPVFSFYLTNNG-SGFGGELVFGANDESRFLPPINWIP 256

  Fly   247 VSMPAYWQFTANSVKIEGIL-----LCNGCQAIADTGTSLIAVPLRAYKAINKVLNATDAGDGEA 306
            |:...|||...::||::|.|     ...|||||.|||||||..|.|....:.:.:.||...:||.
Zfish   257 VTQKGYWQIKLDAVKVQGALSFSDRSVQGCQAIVDTGTSLIGGPARDILILQQFIGATPTANGEF 321

  Fly   307 FVDCSSLCRLPNVNLNIGGTTYTLTPKDYIYKVQADNNQTLCLSGFTYLQ----GNLLWILGDIF 367
            .|||..:..||.|:..|....|:|:.:.|:.: :..||:.:|.|||..::    ...:|||||:|
Zfish   322 VVDCVRVSSLPVVSFLINSVEYSLSGEQYVRR-ETLNNKQICFSGFQSIEVPSPAGPVWILGDVF 385

  Fly   368 LGKVYTVFDVGKERIGFAKL 387
            |.:||:::|.|:.|:|.|:|
Zfish   386 LSQVYSIYDRGENRVGLARL 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6508NP_609457.1 pepsin_retropepsin_like 68..386 CDD:299705 127/327 (39%)
Asp 73..387 CDD:278455 127/323 (39%)
notsNP_571879.1 A1_Propeptide 20..48 CDD:285240 7/31 (23%)
Asp 85..403 CDD:278455 126/321 (39%)
pepsin_retropepsin_like 86..403 CDD:299705 126/320 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170585928
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54317
OrthoDB 1 1.010 - - D1619495at2759
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR47966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.960

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