DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6508 and LOC101733630

DIOPT Version :10

Sequence 1:NP_609457.1 Gene:CG6508 / 34493 FlyBaseID:FBgn0032303 Length:423 Species:Drosophila melanogaster
Sequence 2:XP_012817292.3 Gene:LOC101733630 / 101733630 XenbaseID:XB-GENE-29087091 Length:343 Species:Xenopus tropicalis


Alignment Length:323 Identity:151/323 - (46%)
Similarity:206/323 - (63%) Gaps:8/323 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 EYTIRLCIGTPPQCFNLQFDTGSSDLWVPSVKCSSTNEACQKHNKYNSSASSSHVEDGKGFSIQY 137
            :|...:.:|:|||.|.:.||||||:||||||.||..:.||..|:||:||.||::|::|..|:|||
 Frog    22 QYYGEIGLGSPPQNFTVVFDTGSSNLWVPSVHCSMLDIACWMHHKYDSSKSSTYVKNGTAFAIQY 86

  Fly   138 GSGSLSGFLSTDTVDIDGMVIRNQTFAEAIDEPGSAFVNTIFDGIIGMAFASIS-GGVTTPFDNI 201
            |:|||||:||.|||.|..:.::.|.|.||:.:||..||...||||:|||:..|| .||...||||
 Frog    87 GTGSLSGYLSKDTVTIGNLAVKGQMFGEAVKQPGVTFVAAKFDGILGMAYPVISVDGVPPVFDNI 151

  Fly   202 IRQGLVKHPVFSVYLRRDGTSQSGGEVIWGGIDRSIYRGCINYVPVSMPAYWQFTANSVKI-EGI 265
            :.|.||:..:||.||.|:..:|.|||::.||.|...|.|..:|:.|:..||||...:.:.: :.:
 Frog   152 MAQKLVESNIFSFYLNRNPDTQPGGELLLGGTDPKYYTGDFHYLNVTRKAYWQIHMDQLGVGDQL 216

  Fly   266 LLC-NGCQAIADTGTSLIAVPLRAYKAINKVLNATDAGDGEAFVDCSSLCRLPNVNLNIGGTTYT 329
            .|| .||:.|.|||||||..||....|:.|.:.|.....|:..|.|..:..||.::|.:||..||
 Frog   217 TLCKGGCEVIVDTGTSLITGPLEEVTALQKAIGAVPLIQGQYMVQCDKVPTLPVISLTLGGQVYT 281

  Fly   330 LTPKDYIYKVQADNNQTLCLSGFTYLQ----GNLLWILGDIFLGKVYTVFDVGKERIGFAKLK 388
            ||.:.||.|| :....|:|||||..|.    ...||||||:|:|:.|:|||...:|:||||.|
 Frog   282 LTGEQYIMKV-SQRGSTICLSGFMGLNIPPPAGPLWILGDVFIGQYYSVFDRAYDRVGFAKAK 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6508NP_609457.1 pepsin_retropepsin_like 68..386 CDD:472175 148/319 (46%)
LOC101733630XP_012817292.3 Cathepsin_D2 18..341 CDD:133157 148/319 (46%)

Return to query results.
Submit another query.