DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6508 and LOC100493461

DIOPT Version :10

Sequence 1:NP_609457.1 Gene:CG6508 / 34493 FlyBaseID:FBgn0032303 Length:423 Species:Drosophila melanogaster
Sequence 2:XP_002938556.2 Gene:LOC100493461 / 100493461 XenbaseID:XB-GENE-29081723 Length:402 Species:Xenopus tropicalis


Alignment Length:332 Identity:145/332 - (43%)
Similarity:203/332 - (61%) Gaps:10/332 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 TTQVLANGFNLEYTIRLCIGTPPQCFNLQFDTGSSDLWVPSVKCSSTNEACQKHNKYNSSASSSH 126
            ||:.|.:..|.:|...:.:|||||.|::.||||||:.||||..|.|  ||||.|.::.|..|:|:
 Frog    69 TTEYLVDYMNAQYYGEISVGTPPQNFSVVFDTGSSNFWVPSSYCLS--EACQVHERFKSFESTSY 131

  Fly   127 VEDGKGFSIQYGSGSLSGFLSTDTVDIDGMVIRNQTFAEAIDEPGSAFVNTIFDGIIGMAFASIS 191
            ...|:.|||.||:|.|.|....||:.|..|.|..|.|.|:|.|||..||...|||::|:.:.|::
 Frog   132 EHGGRPFSIHYGTGQLVGVTGRDTLRISNMSIEGQDFGESILEPGRTFVLAQFDGVLGLGYPSLA 196

  Fly   192 -GGVTTPFDNIIRQGLVKHPVFSVYLRRDGTSQSGGEVIWGGIDRSIYRGCINYVPVSMPAYWQF 255
             .|....||.|:.|.||:..:||.:|.||..|:.|||:|:||||.|:|:|.|:::|::...|||.
 Frog   197 VAGAVPVFDRIVNQKLVEQQLFSFHLNRDYDSEYGGELIFGGIDHSLYKGQIHWIPLTEKGYWQI 261

  Fly   256 TANSVKIEG-ILLC-NGCQAIADTGTSLIAVPLRAYKAINKVLNATDAGDGEAFVDCSSLCRLPN 318
            ..::||::| .:.| :.||.|.|:|||||..|....|.:.::|.||....||..:|||.:..||.
 Frog   262 RLDNVKVDGEAMFCQSSCQVIVDSGTSLITGPKAEIKKLQELLGATPTLFGEYILDCSRVSSLPR 326

  Fly   319 VNLNIGGTTYTLTPKDYIYKVQADNNQTLCLSGFTYL----QGNLLWILGDIFLGKVYTVFDVGK 379
            |...||...|||||:.|..|.::..:. .||:||..:    :...||||||||:.|.|:|||...
 Frog   327 VTFTIGQRDYTLTPEQYTIKERSQKSD-FCLTGFQAMDISTKDGPLWILGDIFMSKFYSVFDREH 390

  Fly   380 ERIGFAK 386
            :|||.||
 Frog   391 DRIGLAK 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6508NP_609457.1 pepsin_retropepsin_like 68..386 CDD:472175 140/324 (43%)
LOC100493461XP_002938556.2 A1_Propeptide 19..45 CDD:462326
pepsin_retropepsin_like 75..397 CDD:472175 140/324 (43%)
Blue background indicates that the domain is not in the aligned region.

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