DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6508 and ren

DIOPT Version :10

Sequence 1:NP_609457.1 Gene:CG6508 / 34493 FlyBaseID:FBgn0032303 Length:423 Species:Drosophila melanogaster
Sequence 2:XP_017947014.2 Gene:ren / 100487524 XenbaseID:XB-GENE-480535 Length:395 Species:Xenopus tropicalis


Alignment Length:395 Identity:152/395 - (38%)
Similarity:212/395 - (53%) Gaps:24/395 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IPLFLLLLDHSMGQLRRTPITR--QINQNKTHANVKA----EKILLAAKYFLVDRQSSQTT--QV 65
            :|||.|.: .:....||.|:.|  .|.:......||.    .::.:.|   |.|:..:..|  .|
 Frog     4 LPLFYLFM-VTCDCFRRIPLNRMPSIRETLQSMGVKVTDAFPQLRMKA---LADKNPNNGTAPTV 64

  Fly    66 LANGFNLEYTIRLCIGTPPQCFNLQFDTGSSDLWVPSVKCSSTNEACQKHNKYNSSASSSHVEDG 130
            |.|..:.:|...:.||:|||.|.:.|||||::|||||.:||....||..||:|:|:.|.:::|:|
 Frog    65 LTNYMDTQYFGEISIGSPPQTFKVVFDTGSANLWVPSQRCSPLYSACVSHNRYDSTKSQTYMENG 129

  Fly   131 KGFSIQYGSGSLSGFLSTDTVDIDGMVIRNQTFAEAIDEPGSAFVNTIFDGIIGMAF-ASISGGV 194
            .|||||||||.:.||||.|.|.:.|:.: .|.||||...|...|:...|||::||.| .....|:
 Frog   130 AGFSIQYGSGGVKGFLSQDVVVVAGIPV-IQVFAEATALPAFPFIFARFDGVLGMGFPGQAIDGI 193

  Fly   195 TTPFDNIIRQGLVKHPVFSVYLR---RDGTSQSGGEVIWGGIDRSIYRGCINYVPVSMPAYWQFT 256
            |..||.||.:.:::..|||||..   ||...:.|||:|.||.|.|.|.|...|:.:....||...
 Frog   194 TPVFDRIISEQVLQEDVFSVYYSRSYRDSHLKPGGEIILGGSDPSYYTGSFQYLNLEKEGYWHIR 258

  Fly   257 ANSVKIEG-ILLC-NGCQAIADTGTSLIAVPLRAYKAINKVLNATDAGDGEAFVDCSSLCRLPNV 319
            ...|.|.. ||.| :||....|||.:.|..|..:...:.|.:.||:..:||..|||..:.:||:|
 Frog   259 MKGVSIGAEILFCKDGCSVAIDTGAAYITGPASSVSVLMKAIGATELAEGEYTVDCDKISQLPDV 323

  Fly   320 NLNIGGTTYTLTPKDYIYKVQADNNQTLCLSGFTYLQ----GNLLWILGDIFLGKVYTVFDVGKE 380
            :.::||..|||....||.: |:...:.:|...||.|.    ...|||||..|:|:.||.||....
 Frog   324 SFHMGGNEYTLKGPAYILQ-QSQFGEEICSVAFTPLDIPPPVGPLWILGASFIGQYYTEFDRRNN 387

  Fly   381 RIGFA 385
            |||||
 Frog   388 RIGFA 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6508NP_609457.1 pepsin_retropepsin_like 68..386 CDD:472175 135/328 (41%)
renXP_017947014.2 A1_Propeptide 19..>33 CDD:462326 4/13 (31%)
pepsin_retropepsin_like 65..394 CDD:472175 136/330 (41%)

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