DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6724 and AT5G15550

DIOPT Version :9

Sequence 1:NP_609452.1 Gene:CG6724 / 34488 FlyBaseID:FBgn0032298 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_001332618.1 Gene:AT5G15550 / 831408 AraportID:AT5G15550 Length:433 Species:Arabidopsis thaliana


Alignment Length:430 Identity:132/430 - (30%)
Similarity:216/430 - (50%) Gaps:28/430 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDVDNGEGQVQVHLK--TKQEH-YAVPDVPYAIDGTVTTVELNTFVNALLRQKDGSSDTD-FDFL 61
            ||:|..:...::|:|  ||.:. :.||....||...||.:.|::.||:::..::....|: ||||
plant     1 MDIDGEDVSRRLHVKFVTKLDSPFKVPVNSVAIPSNVTRLGLSSIVNSIIESENPEWKTEPFDFL 65

  Fly    62 VFDEYLRGRLCDHLREKAISFEDAIEIEYVERFPAPEPQDCLLHDDWVSAVKARG-KWILSGCYD 125
            :..|.:|..|.:.|..|.||.|..:||||:......:.::..|||||||||.... ::||:||||
plant    66 IDGELIRMSLEEFLLAKGISAERTLEIEYIRAVTPRKEEEPSLHDDWVSAVNGSSPRFILTGCYD 130

  Fly   126 NTLNLWTNKG--KHILTISGHTAPIKAVDWI-SLDEETGRFVSTSQDQTAMLWQWNV-----GSN 182
            ....:|::.|  .|||  .||:..|.:|..: |.|.||....:.|:|:|..|::::.     .:.
plant   131 GLGRVWSSAGSCSHIL--EGHSGAISSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDSTT 193

  Fly   183 SVECVSVCKGHERGVDSVSVSPDGLRFATGSWDTMLKVWSAELDDAVEGSSKRMK---------E 238
            .|....:.:||:..|.|||....|....:.|||..:.:|:.. :...||.|..:|         |
plant   194 KVRAYKILRGHKASVQSVSAQKSGNMVCSSSWDCTINLWNTN-ESTSEGESVSVKKRKGNNQAEE 257

  Fly   239 SGVRTPKIT-LQGHRESVSAVQWMDATTLLTGSWDHTLKVWDLSLEGIKTEISTNKSIFDASY-S 301
            |......:| |.||.:.||:|.|.:...:.:.||||:::.||:........:...|::..... .
plant   258 SQSEGEAVTSLVGHTQCVSSVVWPEHDVIYSSSWDHSVRRWDVETGKDSLNLFCGKALNTVDVGG 322

  Fly   302 KLNRLILTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGAYDNQNKLWD 366
            :.:.||....:|..||::|||....|.....:..|::|:....|..:..|..:|.:||.:..|||
plant   323 ESSALIAAGGSDPILRVWDPRKPGTSAPVFQFSSHSSWISACKWHKSSWFHLLSASYDGKIMLWD 387

  Fly   367 CRSPKAPLYDLLGHGEKVLDIDWSNPKYIVSGGVDNTVRV 406
            .|: ..||..:..|.:|||..||...:.:||||.|:.:|:
plant   388 LRT-AWPLSVIDTHNDKVLSADWWKGESVVSGGADSNLRI 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6724NP_609452.1 NLE 10..75 CDD:285380 21/68 (31%)
WD40 105..>411 CDD:225201 98/322 (30%)
WD40 105..408 CDD:238121 98/322 (30%)
WD40 repeat 198..250 CDD:293791 16/61 (26%)
WD40 repeat 255..288 CDD:293791 10/32 (31%)
WD40 repeat 296..333 CDD:293791 9/37 (24%)
WD40 repeat 340..378 CDD:293791 11/37 (30%)
AT5G15550NP_001332618.1 NLE 12..79 CDD:400462 21/66 (32%)
WD40 109..426 CDD:238121 97/320 (30%)
WD40 repeat 154..203 CDD:293791 10/48 (21%)
WD40 repeat 208..269 CDD:293791 16/61 (26%)
WD40 repeat 276..310 CDD:293791 9/33 (27%)
WD40 repeat 315..353 CDD:293791 9/37 (24%)
WD40 repeat 361..399 CDD:293791 11/38 (29%)
WD40 repeat 404..426 CDD:293791 9/21 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 51 1.000 Domainoid score I4352
eggNOG 1 0.900 - - E1_KOG0313
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10098
Inparanoid 1 1.050 198 1.000 Inparanoid score I1328
OMA 1 1.010 - - QHG53844
OrthoDB 1 1.010 - - D1540178at2759
OrthoFinder 1 1.000 - - FOG0005032
OrthoInspector 1 1.000 - - oto3706
orthoMCL 1 0.900 - - OOG6_102659
Panther 1 1.100 - - LDO PTHR19855
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3556
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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