DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6724 and wdr12

DIOPT Version :9

Sequence 1:NP_609452.1 Gene:CG6724 / 34488 FlyBaseID:FBgn0032298 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_001025628.1 Gene:wdr12 / 595016 XenbaseID:XB-GENE-945426 Length:423 Species:Xenopus tropicalis


Alignment Length:418 Identity:172/418 - (41%)
Similarity:257/418 - (61%) Gaps:11/418 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 QVQVHLKTKQEHYAVPDVPYAIDGTVTTVELNTFVNALLRQKDGS-SDTDFDFLVFDEYLRGRLC 72
            |:|....|::|.|.|.|||::|..|...|:|:..:|.||..|:|. ...:|||||..::||..|.
 Frog     3 QIQARFFTEEEKYKVDDVPFSIPATSEIVDLSNLINKLLETKNGDHKPVEFDFLVKSQFLRMPLI 67

  Fly    73 DHLREKAISFEDAIEIEYVERFPAPEPQDCLLHDDWVSAVKARGKWILSGCYDNTLNLWTNKGKH 137
            .|:..:.||.|..:||||||:..||:|::|::||||||::....:|||:|.||.|..:|:.:||.
 Frog    68 KHMEAEGISTEVVVEIEYVEKITAPQPEECMMHDDWVSSIAGTEEWILTGSYDKTCRIWSLEGKT 132

  Fly   138 ILTISGHTAPIKAVDWISLDEETGRFVSTSQDQTAMLWQWNVGSNSVECVSVCKGHERGVDSVSV 202
            |:||:|||..:|.|.|:..|..:...:|.|.|||..||:||...|.::.:..|:||...|||::|
 Frog   133 IMTITGHTEAVKDVTWVKKDSLSCLLLSASIDQTIQLWEWNTERNKIKALHCCRGHAGSVDSIAV 197

  Fly   203 SPDGLRFATGSWDTMLKVWSA---ELDDAVEGSSKRMKESG-------VRTPKITLQGHRESVSA 257
            .....:|.:||||.|||:|||   |.:|..|.:|.|.::..       .|.|.:||.||.|:||:
 Frog   198 DASRTKFCSGSWDKMLKIWSAVPSEEEDEYEETSDRPRKKQKTEKMGLTRIPIVTLSGHSEAVSS 262

  Fly   258 VQWMDATTLLTGSWDHTLKVWDLSLEGIKTEISTNKSIFDASYSKLNRLILTASADKNLRLYDPR 322
            |.|.|...:.:.||||.:|:||:....:|:.::.||.....|||.|::.:.:.|.|:::||:|||
 Frog   263 VLWSDVDEICSASWDHNIKIWDVETGTVKSTLAGNKVFNCISYSPLSQRLASGSTDRHIRLWDPR 327

  Fly   323 TNQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGAYDNQNKLWDCRSPKAPLYDLLGHGEKVLDI 387
            :..||:|..:...|..||.:|.||.:.|...|||:.|...||||.||.|||||||..|.:|||.:
 Frog   328 SKDGSLVLCSLTSHTGWVTSVKWSPSHEQQLVSGSLDKLVKLWDTRSCKAPLYDLAAHSDKVLSV 392

  Fly   388 DWSNPKYIVSGGVDNTVRVFKSRKALAE 415
            ||::...|:|||.||.:..::...:|::
 Frog   393 DWTDAGLILSGGSDNKLYSYRYTASLSD 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6724NP_609452.1 NLE 10..75 CDD:285380 25/65 (38%)
WD40 105..>411 CDD:225201 131/315 (42%)
WD40 105..408 CDD:238121 131/312 (42%)
WD40 repeat 198..250 CDD:293791 23/61 (38%)
WD40 repeat 255..288 CDD:293791 13/32 (41%)
WD40 repeat 296..333 CDD:293791 14/36 (39%)
WD40 repeat 340..378 CDD:293791 21/37 (57%)
wdr12NP_001025628.1 Ubiquitin-like (UBL) domain. /evidence=ECO:0000255|HAMAP-Rule:MF_03029 4..87 33/82 (40%)
NLE 4..70 CDD:369718 25/65 (38%)
WD 1 99..137 18/37 (49%)
WD40 100..409 CDD:238121 131/308 (43%)
WD40 repeat 105..138 CDD:293791 14/32 (44%)
WD 2 138..180 17/41 (41%)
WD 3 187..226 18/38 (47%)
WD40 repeat 193..255 CDD:293791 23/61 (38%)
WD 4 255..293 16/37 (43%)
WD40 repeat 260..295 CDD:293791 13/34 (38%)
WD 5 295..334 15/38 (39%)
WD40 repeat 301..339 CDD:293791 14/37 (38%)
WD 6 340..380 20/39 (51%)
WD40 repeat 345..383 CDD:293791 21/37 (57%)
WD 7 384..422 13/37 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 52 1.000 Domainoid score I11334
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10098
Inparanoid 1 1.050 361 1.000 Inparanoid score I2151
OMA 1 1.010 - - QHG53844
OrthoDB 1 1.010 - - D1540178at2759
OrthoFinder 1 1.000 - - FOG0005032
OrthoInspector 1 1.000 - - oto104240
Panther 1 1.100 - - LDO PTHR19855
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2900
SonicParanoid 1 1.000 - - X3556
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

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