DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc2 and UBC1

DIOPT Version :10

Sequence 1:NP_477137.1 Gene:Ubc2 / 34487 FlyBaseID:FBgn0015320 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_563951.1 Gene:UBC1 / 838002 AraportID:AT1G14400 Length:152 Species:Arabidopsis thaliana


Alignment Length:144 Identity:55/144 - (38%)
Similarity:84/144 - (58%) Gaps:5/144 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 KRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPEYPFKPPKVT 153
            ||:.::...:..|||...|..|:.:|:..|.:.|.||..:.::||.|.|.:.||.:||.|||.|.
plant     7 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVR 71

  Fly   154 FRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLQNREE 218
            |.:|::|.||.:.|.||||||::.|||...::.:|.||.|||.|.||..|.....|..|.:::.|
plant    72 FVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSESKRE 136

  Fly   219 HDR-----IARLWT 227
            ::|     :.:.||
plant   137 YNRRVRDVVEQSWT 150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc2NP_477137.1 PHA03247 <4..158 CDD:223021 25/68 (37%)
UBCc_UBE2E 89..229 CDD:467413 55/144 (38%)
UBC1NP_563951.1 UBCc_UBE2A_2B 3..145 CDD:467410 53/137 (39%)

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