DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc2 and UBC30

DIOPT Version :9

Sequence 1:NP_001260362.1 Gene:Ubc2 / 34487 FlyBaseID:FBgn0015320 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_851198.1 Gene:UBC30 / 835714 AraportID:AT5G56150 Length:148 Species:Arabidopsis thaliana


Alignment Length:145 Identity:89/145 - (61%)
Similarity:114/145 - (78%) Gaps:0/145 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 SAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPEYPFKPPK 151
            ::|||.|||.::..|||.:|||||.||::::|.:||:||..|.:.||||.:.|||.|:|||||||
plant     2 ASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPFKPPK 66

  Fly   152 VTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLQNR 216
            |.|||::||.||||.|.|||||||:.||||||:|||||||||||||.||.||||..||..|..:|
plant    67 VAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAHIYKTDR 131

  Fly   217 EEHDRIARLWTKRYA 231
            .:::..|:.||::||
plant   132 VKYESTAQSWTQKYA 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc2NP_001260362.1 COG5078 86..231 CDD:227410 87/143 (61%)
UQ_con 90..227 CDD:278603 84/136 (62%)
UBC30NP_851198.1 UBCc 1..146 CDD:412187 87/143 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0417
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53976
OrthoDB 1 1.010 - - D1337945at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.830

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