DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc2 and UBC10

DIOPT Version :9

Sequence 1:NP_001260362.1 Gene:Ubc2 / 34487 FlyBaseID:FBgn0015320 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_001190528.1 Gene:UBC10 / 835411 AraportID:AT5G53300 Length:148 Species:Arabidopsis thaliana


Alignment Length:145 Identity:88/145 - (60%)
Similarity:112/145 - (77%) Gaps:0/145 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 SAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPEYPFKPPK 151
            ::|||.|||.::..|||.:|||||..::::.|.:||:||..|.|.||||.:.|||.|:|||||||
plant     2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFKPPK 66

  Fly   152 VTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLQNR 216
            |.|||:::|.||||.|.|||||||:.||||||||||||||||||||.||.||||..||..|..::
plant    67 VAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDK 131

  Fly   217 EEHDRIARLWTKRYA 231
            .:::..||.||::||
plant   132 NKYESTARSWTQKYA 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc2NP_001260362.1 COG5078 86..231 CDD:227410 86/143 (60%)
UQ_con 90..227 CDD:278603 83/136 (61%)
UBC10NP_001190528.1 UBCc 1..146 CDD:412187 86/143 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0417
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53976
OrthoDB 1 1.010 - - D1337945at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.830

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