DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc2 and Ube2b

DIOPT Version :10

Sequence 1:NP_477137.1 Gene:Ubc2 / 34487 FlyBaseID:FBgn0015320 Length:232 Species:Drosophila melanogaster
Sequence 2:XP_006246405.1 Gene:Ube2b / 81816 RGDID:708345 Length:180 Species:Rattus norvegicus


Alignment Length:157 Identity:61/157 - (38%)
Similarity:91/157 - (57%) Gaps:5/157 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 GGDEPRKEAKTTPRISRALGTSA-KRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSV 129
            ||    .||:.|....|::.|.| :|:.::...:..|||...|..|..:|:.:|.:.|.||.|:.
  Rat    15 GG----SEARLTAGQLRSMSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTP 75

  Fly   130 YEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSL 194
            :|.|.|.|.|.||.|||.|||.|.|.::::|.|:.:.|.||||||::.|||...:|.:|.||.||
  Rat    76 FEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSL 140

  Fly   195 LTDCNPADPLVGSIATQYLQNREEHDR 221
            |.:.||..|.....|..|.:|:.|:::
  Rat   141 LDEPNPNSPANSQAAQLYQENKREYEK 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc2NP_477137.1 PHA03247 <4..158 CDD:223021 35/92 (38%)
UBCc_UBE2E 89..229 CDD:467413 53/133 (40%)
Ube2bXP_006246405.1 UBCc_UBE2A_2B 31..173 CDD:467410 55/137 (40%)

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