DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc2 and Ube2w

DIOPT Version :9

Sequence 1:NP_001260362.1 Gene:Ubc2 / 34487 FlyBaseID:FBgn0015320 Length:232 Species:Drosophila melanogaster
Sequence 2:XP_006495620.1 Gene:Ube2w / 66799 MGIID:1914049 Length:174 Species:Mus musculus


Alignment Length:119 Identity:48/119 - (40%)
Similarity:70/119 - (58%) Gaps:4/119 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 LGTSAKRIQKELAEITLDPPPNCSAGPKG--DNLYEWVSTILGPPGSVYEGGVFFLDIHFSPEYP 146
            :.:..||:||||..:..||||..:...|.  :::.:|:..:.|.||::|||..|.|...||..||
Mouse    30 MASMQKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYP 94

  Fly   147 FKPPKVTF--RTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDC 198
            |..|:|.|  .....|.::.|.|.|||.||.::|||||::..|.|||.|:|:.|
Mouse    95 FDSPQVMFTGENIPIHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLSSC 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc2NP_001260362.1 COG5078 86..231 CDD:227410 48/117 (41%)
UQ_con 90..227 CDD:278603 47/113 (42%)
Ube2wXP_006495620.1 UQ_con 36..>148 CDD:365926 46/111 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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