DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc2 and ube2k

DIOPT Version :10

Sequence 1:NP_477137.1 Gene:Ubc2 / 34487 FlyBaseID:FBgn0015320 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_001005662.1 Gene:ube2k / 448153 XenbaseID:XB-GENE-983372 Length:200 Species:Xenopus tropicalis


Alignment Length:150 Identity:67/150 - (44%)
Similarity:85/150 - (56%) Gaps:6/150 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 SAKRIQKELAEITLDPPPNCSAGPKGD----NLYEWVSTILGPPGSVYEGGVFFLDIHFSPEYPF 147
            :|:||::|..|: |..........|.|    |..|....|.|||.:.||||.:.|:|.....|||
 Frog     5 AAQRIKREFKEV-LKSEETSKNQIKVDLVDENFSELRGEIAGPPDTPYEGGRYQLEIKIPETYPF 68

  Fly   148 KPPKVTFRTRIYHCNINS-QGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQ 211
            .||||.|.|:|:|.||:| .|.||||||||.|:.|:|:..||||:.:||....|.||....:|.|
 Frog    69 NPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQ 133

  Fly   212 YLQNREEHDRIARLWTKRYA 231
            |.||.|...:.||||...||
 Frog   134 YKQNPEMFKQTARLWAHVYA 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc2NP_477137.1 PHA03247 <4..158 CDD:223021 29/74 (39%)
UBCc_UBE2E 89..229 CDD:467413 64/144 (44%)
ube2kNP_001005662.1 UBCc_UBE2K 6..151 CDD:467420 65/145 (45%)
UBA_II_E2_UBE2K 163..200 CDD:270573
Blue background indicates that the domain is not in the aligned region.

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