DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc2 and ube2b

DIOPT Version :9

Sequence 1:NP_001260362.1 Gene:Ubc2 / 34487 FlyBaseID:FBgn0015320 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_001002747.1 Gene:ube2b / 437020 ZFINID:ZDB-GENE-040718-247 Length:152 Species:Danio rerio


Alignment Length:139 Identity:55/139 - (39%)
Similarity:82/139 - (58%) Gaps:1/139 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 LGTSA-KRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPEYPF 147
            :.|.| :|:.::...:..|||...|..|..:|:..|.:.|.||.|:.:|.|.|.|.|.||.|||.
Zfish     1 MSTQARRRLMRDFKRLQEDPPTGVSGAPSENNIMLWNAVIFGPVGTPFEDGTFKLVIEFSEEYPN 65

  Fly   148 KPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQY 212
            |||.|.|.::::|.|:.:.|.||||||::.|||...:|.:|.||.|||.:.||..|.....|..|
Zfish    66 KPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLY 130

  Fly   213 LQNREEHDR 221
            .:|:.|:::
Zfish   131 QENKREYEK 139

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc2NP_001260362.1 COG5078 86..231 CDD:227410 55/137 (40%)
UQ_con 90..227 CDD:278603 53/132 (40%)
ube2bNP_001002747.1 COG5078 1..151 CDD:227410 55/139 (40%)
UQ_con 8..145 CDD:278603 53/132 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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