DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ubc2 and ube2l3a

DIOPT Version :10

Sequence 1:NP_477137.1 Gene:Ubc2 / 34487 FlyBaseID:FBgn0015320 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_001002072.1 Gene:ube2l3a / 415162 ZFINID:ZDB-GENE-030131-2977 Length:154 Species:Danio rerio


Alignment Length:153 Identity:53/153 - (34%)
Similarity:87/153 - (56%) Gaps:17/153 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 SAKRIQKELAEITLDPPPNCSAGPKG--------DNLYEWVSTILGPPGSVYEGGVFFLDIHFSP 143
            :::|:.|||.||.       .:|.|.        .|:..|...|: |....|:.|.|.::|.|..
Zfish     3 ASRRLHKELDEIR-------KSGMKNFRNIQVDESNILTWQGLIV-PDNPPYDKGAFRIEITFPA 59

  Fly   144 EYPFKPPKVTFRTRIYHCNINSQGVICLDILK-DNWSPALTISKVLLSICSLLTDCNPADPLVGS 207
            ||||||||:||:|:|||.||:.:|.:||.::. :||.||....:|:.|:.:|:.|..|..||...
Zfish    60 EYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRAD 124

  Fly   208 IATQYLQNREEHDRIARLWTKRY 230
            :|.:|.::|::..:.|..:||::
Zfish   125 LAEEYSKDRKKFFKNAEEFTKKH 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc2NP_477137.1 PHA03247 <4..158 CDD:223021 28/78 (36%)
UBCc_UBE2E 89..229 CDD:467413 52/148 (35%)
ube2l3aNP_001002072.1 UBCc_UBE2L3 3..149 CDD:467421 53/153 (35%)

Return to query results.
Submit another query.