DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ubc2 and ube2d1a

DIOPT Version :10

Sequence 1:NP_477137.1 Gene:Ubc2 / 34487 FlyBaseID:FBgn0015320 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_957404.1 Gene:ube2d1a / 394085 ZFINID:ZDB-GENE-040426-1609 Length:147 Species:Danio rerio


Alignment Length:143 Identity:91/143 - (63%)
Similarity:112/143 - (78%) Gaps:0/143 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 KRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPEYPFKPPKVT 153
            |||||||.::..|||..|||||.|::|:.|.:||:||..|.|:||||||.|||..:||||||||.
Zfish     4 KRIQKELQDLQRDPPSQCSAGPLGEDLFHWQATIMGPGDSPYQGGVFFLTIHFPTDYPFKPPKVA 68

  Fly   154 FRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLQNREE 218
            |.|:|||.||||.|.||||||:..||||||:|||||||||||.|.||.||||..||..|..::::
Zfish    69 FTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAHIYKSDKDK 133

  Fly   219 HDRIARLWTKRYA 231
            ::|:||.||::||
Zfish   134 YNRLAREWTQKYA 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc2NP_477137.1 PHA03247 <4..158 CDD:223021 43/68 (63%)
UBCc_UBE2E 89..229 CDD:467413 89/139 (64%)
ube2d1aNP_957404.1 UBCc_UBE2D 3..145 CDD:467412 89/140 (64%)

Return to query results.
Submit another query.