DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc2 and ube2nb

DIOPT Version :10

Sequence 1:NP_477137.1 Gene:Ubc2 / 34487 FlyBaseID:FBgn0015320 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_956636.1 Gene:ube2nb / 393313 ZFINID:ZDB-GENE-040426-1291 Length:154 Species:Danio rerio


Alignment Length:143 Identity:66/143 - (46%)
Similarity:82/143 - (57%) Gaps:0/143 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 KRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPEYPFKPPKVT 153
            :||.||...:..:|.|...|.|...|...:...|.||..|.:|||.|.|::....|||...|||.
Zfish     6 RRIIKETQRLLAEPVPGIKAEPDEGNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVR 70

  Fly   154 FRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLQNREE 218
            |.|:|||.|::..|.||||||||.|||||.|..|||||.:||:..||.|||...:|.|:..|..:
Zfish    71 FMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKSNEAQ 135

  Fly   219 HDRIARLWTKRYA 231
            ....||.||:.||
Zfish   136 AIETARTWTRLYA 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc2NP_477137.1 PHA03247 <4..158 CDD:223021 26/68 (38%)
UBCc_UBE2E 89..229 CDD:467413 64/139 (46%)
ube2nbNP_956636.1 UBCc_UBE2N 4..147 CDD:467433 64/140 (46%)

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