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Protein Alignment Ubc2 and Ube2d1
DIOPT Version :9
Sequence 1: | NP_001260362.1 |
Gene: | Ubc2 / 34487 |
FlyBaseID: | FBgn0015320 |
Length: | 232 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_017457176.1 |
Gene: | Ube2d1 / 361831 |
RGDID: | 1307886 |
Length: | 194 |
Species: | Rattus norvegicus |
Alignment Length: | 179 |
Identity: | 95/179 - (53%) |
Similarity: | 121/179 - (67%) |
Gaps: | 19/179 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 68 DEPRKEAKTTPRISRALGTSAKRIQ---------------KELAEITLDPPPNCSAGPKGDNLYE 117
::|:.||... .||.||.:|.. .||:::..|||.:|||||.||:|:.
Rat 19 NKPKFEAAAV----IALLTSDRRCSVGFPFGSFQTLLLFVMELSDLQRDPPAHCSAGPVGDDLFH 79
Fly 118 WVSTILGPPGSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPAL 182
|.:||:|||.|.|:||||||.:||..:|||||||:.|.|:|||.||||.|.||||||:..|||||
Rat 80 WQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPAL 144
Fly 183 TISKVLLSICSLLTDCNPADPLVGSIATQYLQNREEHDRIARLWTKRYA 231
|:|||||||||||.|.||.||||..||..|..::|:::|.||.||::||
Rat 145 TVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNRHAREWTQKYA 193
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Ubc2 | NP_001260362.1 |
COG5078 |
86..231 |
CDD:227410 |
88/159 (55%) |
UQ_con |
90..227 |
CDD:278603 |
84/151 (56%) |
Ube2d1 | XP_017457176.1 |
None |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E2759_KOG0417 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
1 |
1.010 |
- |
- |
|
QHG53976 |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1337945at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
4 | 3.830 |
|
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