DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ubc2 and Ube2d1

DIOPT Version :10

Sequence 1:NP_477137.1 Gene:Ubc2 / 34487 FlyBaseID:FBgn0015320 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_001102000.1 Gene:Ube2d1 / 361831 RGDID:1307886 Length:147 Species:Rattus norvegicus


Alignment Length:143 Identity:92/143 - (64%)
Similarity:114/143 - (79%) Gaps:0/143 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 KRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPEYPFKPPKVT 153
            |||||||:::..|||.:|||||.||:|:.|.:||:|||.|.|:||||||.:||..:|||||||:.
  Rat     4 KRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIA 68

  Fly   154 FRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLQNREE 218
            |.|:|||.||||.|.||||||:..||||||:|||||||||||.|.||.||||..||..|..::|:
  Rat    69 FTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEK 133

  Fly   219 HDRIARLWTKRYA 231
            ::|.||.||::||
  Rat   134 YNRHAREWTQKYA 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc2NP_477137.1 PHA03247 <4..158 CDD:223021 43/68 (63%)
UBCc_UBE2E 89..229 CDD:467413 90/139 (65%)
Ube2d1NP_001102000.1 UBCc_UBE2D 3..145 CDD:467412 90/140 (64%)

Return to query results.
Submit another query.