DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc2 and ube2kb

DIOPT Version :10

Sequence 1:NP_477137.1 Gene:Ubc2 / 34487 FlyBaseID:FBgn0015320 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_001008611.1 Gene:ube2kb / 30100 ZFINID:ZDB-GENE-980605-9 Length:200 Species:Danio rerio


Alignment Length:147 Identity:63/147 - (42%)
Similarity:82/147 - (55%) Gaps:16/147 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 TSAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPEYPFKPP 150
            ||..:|:.:|.:               :|..|....|.|||.:.||||.:.|:|.....|||.||
Zfish    22 TSKNQIKVDLVD---------------ENFTELKGEIAGPPDTPYEGGRYQLEIKIPETYPFNPP 71

  Fly   151 KVTFRTRIYHCNINS-QGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLQ 214
            ||.|.|:|:|.||:| .|.||||||||.|:.|:|:..||||:.:||....|.||....:|.||.|
Zfish    72 KVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQ 136

  Fly   215 NREEHDRIARLWTKRYA 231
            |.|...:.||||:..||
Zfish   137 NPEMFKQTARLWSHVYA 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc2NP_477137.1 PHA03247 <4..158 CDD:223021 25/71 (35%)
UBCc_UBE2E 89..229 CDD:467413 59/140 (42%)
ube2kbNP_001008611.1 UBCc_UBE2K 6..151 CDD:467420 61/143 (43%)
UBA_II_E2_UBE2K 163..200 CDD:270573
Blue background indicates that the domain is not in the aligned region.

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