DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc2 and Ube2k

DIOPT Version :10

Sequence 1:NP_477137.1 Gene:Ubc2 / 34487 FlyBaseID:FBgn0015320 Length:232 Species:Drosophila melanogaster
Sequence 2:XP_038947644.1 Gene:Ube2k / 289623 RGDID:1311626 Length:210 Species:Rattus norvegicus


Alignment Length:147 Identity:63/147 - (42%)
Similarity:81/147 - (55%) Gaps:16/147 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 TSAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPEYPFKPP 150
            ||..:|:.:|.:               :|..|....|.|||.:.||||.:.|:|.....|||.||
  Rat    32 TSKNQIKVDLVD---------------ENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPP 81

  Fly   151 KVTFRTRIYHCNINS-QGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLQ 214
            ||.|.|:|:|.||:| .|.||||||||.|:.|:|:..||||:.:||....|.||....:|.||.|
  Rat    82 KVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQ 146

  Fly   215 NREEHDRIARLWTKRYA 231
            |.|...:.||||...||
  Rat   147 NPEMFKQTARLWAHVYA 163

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc2NP_477137.1 PHA03247 <4..158 CDD:223021 25/71 (35%)
UBCc_UBE2E 89..229 CDD:467413 59/140 (42%)
Ube2kXP_038947644.1 UBCc_UBE2K 31..161 CDD:467420 61/143 (43%)
UBA_II_E2_UBE2K 173..210 CDD:270573
Blue background indicates that the domain is not in the aligned region.

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