DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ubc2 and ubc14

DIOPT Version :10

Sequence 1:NP_477137.1 Gene:Ubc2 / 34487 FlyBaseID:FBgn0015320 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_594859.1 Gene:ubc14 / 2541565 PomBaseID:SPAC1250.03 Length:155 Species:Schizosaccharomyces pombe


Alignment Length:153 Identity:64/153 - (41%)
Similarity:93/153 - (60%) Gaps:1/153 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 ISRALGTSAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPE 144
            ::.|..:|::|:.||.:::...|.|:.......|||:.|..|.|||..|||.||.|...:.|..:
pombe     1 MASASPSSSRRLTKEYSDLREHPIPDIRVNLVDDNLFHWACTALGPSDSVYAGGKFHFSLKFPLD 65

  Fly   145 YPFKPPKVTFRTRIYHCNINSQGVICLDILKDN-WSPALTISKVLLSICSLLTDCNPADPLVGSI 208
            |||:||.:.|.|||||.|.:|:|.:||.|||.. :.|::.:..||..|..||.:.||.||||.||
pombe    66 YPFQPPTIEFTTRIYHPNFDSEGNVCLAILKQQVFKPSIKLRSVLEQILQLLREPNPDDPLVASI 130

  Fly   209 ATQYLQNREEHDRIARLWTKRYA 231
            |.||..:|...|:|||.:.:::|
pombe   131 AEQYRNDRPSFDKIARDYVEQFA 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc2NP_477137.1 PHA03247 <4..158 CDD:223021 29/77 (38%)
UBCc_UBE2E 89..229 CDD:467413 61/140 (44%)
ubc14NP_594859.1 UBCc_SpUBC14-like 12..152 CDD:467435 60/139 (43%)

Return to query results.
Submit another query.