DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc2 and ubc1

DIOPT Version :10

Sequence 1:NP_477137.1 Gene:Ubc2 / 34487 FlyBaseID:FBgn0015320 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_596239.1 Gene:ubc1 / 2540277 PomBaseID:SPBC2D10.20 Length:217 Species:Schizosaccharomyces pombe


Alignment Length:145 Identity:64/145 - (44%)
Similarity:86/145 - (59%) Gaps:1/145 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 AKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPEYPFKPPKV 152
            ::||.||||::..|...........|::........||.|:.||||.|.:||....:|||:|||:
pombe     6 SRRIAKELADVQQDKQAGIQVWTINDDISHLKGMFRGPEGTPYEGGYFVVDIEIPIDYPFRPPKM 70

  Fly   153 TFRTRIYHCNINSQ-GVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLQNR 216
            .|.|:|||.|::|| |.||||||||.|||..|:...|:|:.|||....|::|....:|..||||.
pombe    71 NFDTKIYHPNVSSQTGAICLDILKDQWSPVYTMKSALISLQSLLCTPEPSNPQDAQVAQVYLQNY 135

  Fly   217 EEHDRIARLWTKRYA 231
            ::..|.||.||..||
pombe   136 QQFVRTAREWTSSYA 150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc2NP_477137.1 PHA03247 <4..158 CDD:223021 26/69 (38%)
UBCc_UBE2E 89..229 CDD:467413 62/140 (44%)
ubc1NP_596239.1 UBCc_UBE2K 6..146 CDD:467420 60/139 (43%)

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