DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc2 and ubc-12

DIOPT Version :10

Sequence 1:NP_477137.1 Gene:Ubc2 / 34487 FlyBaseID:FBgn0015320 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_493024.1 Gene:ubc-12 / 173072 WormBaseID:WBGene00006707 Length:180 Species:Caenorhabditis elegans


Alignment Length:153 Identity:51/153 - (33%)
Similarity:68/153 - (44%) Gaps:20/153 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 SAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPEYPFKPPK 151
            :|.|.||:.......|..:|        |:|...|:. |...:|.||.|...|...|||...||.
 Worm    38 TALRDQKQKLWHLEVPSTSC--------LHELELTVT-PQEGIYRGGKFRFKITVPPEYNNVPPV 93

  Fly   152 VTFRTRIYHCNINSQGVICLDILKDN------WSPALTISKVLLSICSL---LTDCNPADPLVGS 207
            |...|:::|.|||..|.|||.||:.|      |.|...::.|:..:.||   |.|.|  |.|...
 Worm    94 VKCLTKVWHPNINEDGSICLSILRQNSLDQYGWRPTRNLTDVVHGLVSLFNDLMDFN--DALNIQ 156

  Fly   208 IATQYLQNREEHDRIARLWTKRY 230
            .|..:.||||..:...|.:..||
 Worm   157 AAQMWSQNRESFNHRVREYISRY 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc2NP_477137.1 PHA03247 <4..158 CDD:223021 22/70 (31%)
UBCc_UBE2E 89..229 CDD:467413 48/148 (32%)
ubc-12NP_493024.1 UBCc_UBE2F_UBE2M 24..174 CDD:467414 48/146 (33%)

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