DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ubc2 and UbcE2M

DIOPT Version :10

Sequence 1:NP_477137.1 Gene:Ubc2 / 34487 FlyBaseID:FBgn0015320 Length:232 Species:Drosophila melanogaster
Sequence 2:XP_315947.2 Gene:UbcE2M / 1276584 VectorBaseID:AGAMI1_012622 Length:183 Species:Anopheles gambiae


Alignment Length:158 Identity:53/158 - (33%)
Similarity:86/158 - (54%) Gaps:9/158 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 EPRKEAKTTPRI--SRALGTSAK-RIQKELAEITLDPPPNCSAG-PKGDNLYEWVSTILGPPGSV 129
            :.:|:.:.||:.  .:...|:|: ||.|::.|:.|  |..|:.. |..|:|..: ..|:.|....
Mosquito     9 QQKKDGEATPKAGGQKKTFTAAQLRITKDINELNL--PKTCATEFPDPDDLLNF-KLIICPDEGF 70

  Fly   130 YEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSL 194
            |:.|.|..:....|.||.:||||...|::||.||:.:|.:||:||:::|.|.|||:.::..:..|
Mosquito    71 YKSGRFVFNFKVGPNYPHEPPKVKCETQVYHPNIDLEGNVCLNILREDWKPVLTINSIVYGLQYL 135

  Fly   195 LTDCNPADPLVGSIATQYLQNRE--EHD 220
            ..:.||.|||....|.....||.  ||:
Mosquito   136 FLEPNPEDPLNREAAEVLQTNRRLFEHN 163

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc2NP_477137.1 PHA03247 <4..158 CDD:223021 28/92 (30%)
UBCc_UBE2E 89..229 CDD:467413 48/136 (35%)
UbcE2MXP_315947.2 UBCc_UBE2F_UBE2M 29..164 CDD:467414 49/138 (36%)

Return to query results.
Submit another query.