DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6495 and lrp11

DIOPT Version :9

Sequence 1:NP_609451.1 Gene:CG6495 / 34486 FlyBaseID:FBgn0027550 Length:675 Species:Drosophila melanogaster
Sequence 2:XP_005160377.1 Gene:lrp11 / 569216 ZFINID:ZDB-GENE-030131-7847 Length:544 Species:Danio rerio


Alignment Length:714 Identity:145/714 - (20%)
Similarity:213/714 - (29%) Gaps:275/714 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 KYLEYLQSSPAEHRLSKRMDLEVCIGHFDVHKNTIIRTGESQAIGGKYLQG-IELDTIEECERLC 87
            ::.:.||......| .:..|.:.|:..|...::.|||...|...|..:|.. ..:.:..:|.|.|
Zfish    44 EFRKQLQQDEPSSR-EQEGDGDRCVAGFRAAESRIIRASASIEQGAAFLSAPPRVFSWRDCARAC 107

  Fly    88 CETDACDVYIFERKA-----GGYCYLFECGPPEDFRCKFTRHANY--------------TSAVLN 133
            |....|.|.|.:...     ...||||.|.......|.|:....:              |:|...
Zfish   108 CSLPHCTVAIIQEDLKQPDDSLRCYLFNCTYRGKSVCSFSYQPGFSTYSRLNDSSGAPGTAATDR 172

  Fly   134 PQPKP---VGE-------LVTTPRP--------QLP----------HIPSNNVSQQEWELSNLKL 170
            |..:|   :||       |...||.        |||          ....:::::.||.|  ::.
Zfish   173 PAGRPAPALGEEEAMMQDLDEPPRSDAGQDLVVQLPTDWAVLDGRDSTDDHHITRYEWAL--VRG 235

  Fly   171 KPEARDKPT-------------VSTAAV-VAPTSGTGTGTGVGLGVGQSPVYQSQSVPAAHCGRF 221
            .|..:.|.|             |.|..: |..|:|..:...|.:.| .:|...:| |...||.|:
Zfish   236 DPSVKMKVTHPGLLKLSGLREGVYTFEITVIDTAGQKSSDNVSVSV-LAPAPNAQ-VCTGHCSRY 298

  Fly   222 QFTCHSGECIAVYNACDGIPQCEDGSDEGPECNIVLSTATKPATTSSNLEPVKPMVSQYVPVQNV 286
            ||.|..|.||.:..||||...|.|.||| ..|                              ||.
Zfish   299 QFMCDDGCCIDIGYACDGKQHCPDRSDE-DFC------------------------------QNF 332

  Fly   287 QQTQQVVAQQMQQQQPQQQQQQPQQQPQHVIVLGPPPPPPPPPPMVNNREDAAAWANRKMIAEGQ 351
            .                                             :.|:.:::.....:..|..
Zfish   333 D---------------------------------------------SGRKSSSSKHGADLQTEAA 352

  Fly   352 QQLPQQQLQQQQQQQSSQPKTEIINTDAQSHIFSHKGGLQLQQPANGQGPPPSPLQVPGQMAGAG 416
            .|.|           :....|:|...:|..|.     |...|.|.   ..||    |.|...|. 
Zfish   353 AQTP-----------TEMQHTDISKPEAHQHY-----GFSNQDPC---AAPP----VVGPCKGV- 393

  Fly   417 QVQVQGQSPTLQLPGYEANQAVYGMSRTGIYMPQQPAQLQAPAGQQQQQVQASVVWPQQAPLIPQ 481
                        .|.:      |..|.|||.   |..|.....|.....:|.|            
Zfish   394 ------------FPRW------YYDSETGIC---QHFQYGGCKGNHNNFLQKS------------ 425

  Fly   482 QQSPVQQSQSLMPQQSGHVYAAAAPAIQSPPAAQQAMLPVLNAAPVAGKNQGPAADGDYDDYDEE 546
                                ......||.|..|:..    ..|.|:               :..:
Zfish   426 --------------------DCVNECIQKPTVAKHQ----TTATPL---------------FSFK 451

  Fly   547 TYTEAPKKKQHKHKKVKTKTAKDPIELALEQNKLQPEGSLPALPVPASPVHEQYKMIHDNLAMEF 611
            :|| .|....|:.|:        |..|...||.|....:...|                      
Zfish   452 SYT-TPVASVHQEKR--------PNPLLDSQNSLAERKTQRLL---------------------- 485

  Fly   612 RDHDGHSERPGGAVLSLTLGLLVTAALAILIGCRMRTVTRRARRLGGKTPYSQEADFLVNGMYL 675
               :||.....||:|.|..|||::|.|.:::|||:..|.||.::....|  ::|:|:|:|||||
Zfish   486 ---EGHPPPESGAILPLAFGLLISALLLLMVGCRLFLVRRRLKKALPLT--TEESDYLINGMYL 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6495NP_609451.1 MANEC 47..129 CDD:284837 22/101 (22%)
LDLa 218..249 CDD:238060 15/30 (50%)
lrp11XP_005160377.1 LolA 12..>64 CDD:302782 4/20 (20%)
MANEC 66..154 CDD:284837 22/87 (25%)
LDLa 295..329 CDD:238060 17/34 (50%)
KU 379..432 CDD:238057 17/113 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 44 1.000 Domainoid score I12286
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 109 1.000 Inparanoid score I4881
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005567
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR46876
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5879
SonicParanoid 1 1.000 - - X5981
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
77.180

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