DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12299 and ZNF559

DIOPT Version :10

Sequence 1:NP_609448.1 Gene:CG12299 / 34483 FlyBaseID:FBgn0032295 Length:736 Species:Drosophila melanogaster
Sequence 2:NP_001189335.1 Gene:ZNF559 / 84527 HGNCID:28197 Length:602 Species:Homo sapiens


Alignment Length:322 Identity:108/322 - (33%)
Similarity:170/322 - (52%) Gaps:49/322 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   251 QKCFQCTHCEASFPNAG----------------------------DLSKHVRSHITNKPFQCSIC 287
            :|.::|..|...|..:.                            ||:||:|.....|.:.|:.|
Human   302 EKFYECKACGKPFTESSYLTQHLRTHSRVLPIEHKKFGKAFAFSPDLAKHIRLRTRGKHYVCNEC 366

  Fly   288 QKTFTHIGSLNTHIRIHSGEKPYKCELCPKAFTQSSSLMVHMRSHSVRKPHQCVQCDKGFINYSS 352
            .|.||....||.|||:|:|||||:|..|.||||.||.|:.|.|:|:..||::|.:|.|.|.|.|.
Human   367 GKEFTCFSKLNIHIRVHTGEKPYECNKCGKAFTDSSGLIKHRRTHTGEKPYECKECGKAFANSSH 431

  Fly   353 LLLHQKTHIAPTETFICPECEREFKAEALLDEHMRMHTQELVYQCAICREAFRASSELVQHMKNH 417
            |.:|.:||.. .:.:.|.||.:.|...:....||:.|.....|.|..|.:||..||.|::|:::|
Human   432 LTVHMRTHTG-EKPYQCKECGKAFINSSSFKSHMQTHPGVKPYDCQQCGKAFIRSSFLIRHLRSH 495

  Fly   418 MGEKPFTCSLCDRSFTQSGSLNIHMRIHTGEKPFQCKLCDKCFTQASSLSVHMKIHAGEKPYPCP 482
            ..|:||.|..|.::|..|..|:.|.||||||:|::|:.|.:.|:.:|.|:|||:.|.||:|:.|.
Human   496 SAERPFECEECGKAFRYSSHLSQHKRIHTGERPYKCQKCGQAFSISSGLTVHMRTHTGERPFECQ 560

  Fly   483 ICGKSYSQQAYLNKHIQAHQMASAASASTSPGLLVAKQPHETLVCIVCGSLHADATALASHV 544
            .|||::::..||.:|:::|.:               ::|::.     ||...::::.|...|
Human   561 ECGKAFTRSTYLIRHLRSHSV---------------EKPYKE-----CGQTFSNSSCLTECV 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12299NP_609448.1 COG5048 245..>501 CDD:227381 102/277 (37%)
C2H2 Zn finger 256..276 CDD:275368 8/47 (17%)
C2H2 Zn finger 284..304 CDD:275368 10/19 (53%)
zf-H2C2_2 296..321 CDD:463886 16/24 (67%)
C2H2 Zn finger 312..332 CDD:275368 11/19 (58%)
C2H2 Zn finger 340..360 CDD:275368 8/19 (42%)
C2H2 Zn finger 369..389 CDD:275368 6/19 (32%)
C2H2 Zn finger 397..417 CDD:275368 8/19 (42%)
zf-H2C2_2 409..434 CDD:463886 9/24 (38%)
C2H2 Zn finger 425..445 CDD:275368 7/19 (37%)
zf-H2C2_2 437..462 CDD:463886 12/24 (50%)
C2H2 Zn finger 453..473 CDD:275368 8/19 (42%)
C2H2 Zn finger 481..501 CDD:275368 7/19 (37%)
ZNF559NP_001189335.1 KRAB 77..118 CDD:460171
C2H2 Zn finger 158..177 CDD:275368
C2H2 Zn finger 185..240 CDD:275368
COG5048 212..601 CDD:227381 107/319 (34%)
C2H2 Zn finger 213..243 CDD:275368
C2H2 Zn finger 251..299 CDD:275368
C2H2 Zn finger 307..327 CDD:275368 3/19 (16%)
C2H2 Zn finger 363..383 CDD:275368 10/19 (53%)
C2H2 Zn finger 391..411 CDD:275368 11/19 (58%)
C2H2 Zn finger 419..439 CDD:275368 8/19 (42%)
C2H2 Zn finger 447..467 CDD:275368 6/19 (32%)
C2H2 Zn finger 475..495 CDD:275368 8/19 (42%)
C2H2 Zn finger 503..523 CDD:275368 7/19 (37%)
C2H2 Zn finger 531..551 CDD:275368 8/19 (42%)
C2H2 Zn finger 559..579 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.

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