DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12299 and Zbtb42

DIOPT Version :9

Sequence 1:NP_609448.1 Gene:CG12299 / 34483 FlyBaseID:FBgn0032295 Length:736 Species:Drosophila melanogaster
Sequence 2:NP_001119774.1 Gene:Zbtb42 / 691556 RGDID:1582758 Length:420 Species:Rattus norvegicus


Alignment Length:364 Identity:89/364 - (24%)
Similarity:123/364 - (33%) Gaps:115/364 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 LPQQAPNP-PQQQP------QQPQPPDLTFHCMCCAEFFVHPLALYQHMNTLHPHEPGNGQQEQE 83
            ||.|.|:| |...|      .:.:||.|....       ||||..:         .|.:.|..:|
  Rat   134 LPGQTPHPLPSWPPAFCQATPKAKPPSLGVKA-------VHPLPKF---------GPPSWQVSEE 182

  Fly    84 S---------PGDESEDYSWIFEPVCELAEDGSDSSDGSASSGSDSSSSSDDDDDDDDDDSSSSS 139
            |         ||...|.    ..|.|.|    ..|...|...|:.....::.|        |.|.
  Rat   183 SSGALDLSLKPGPRPEQ----AHPPCLL----QTSQCSSIQQGAQPLVKAEQD--------SFSE 231

  Fly   140 SSSSNSSSSSSSVPTTSNSNTQQSQESVQPLHGLVAGPGYNEFQLQMTDPRESTSIFMVQPTVSV 204
            ..||:..|:..|.|....|..:....:::|||  :.|.|                          
  Rat   232 QDSSSPQSADRSPPPVCASAARGLAVNLEPLH--IQGTG-------------------------- 268

  Fly   205 TPLQQLLPPAPTVSPGLGLQSTPIKRRRGRRSNIGAPVMDPALNGNQKCFQCTHCEASFPNAGDL 269
                         |..|||.:.|:         :.:..:.|   |...|. |..|...||:...|
  Rat   269 -------------SQQLGLHAEPV---------VDSEDLGP---GRHLCI-CPLCCKLFPSTHAL 307

  Fly   270 SKHVRSHITNKPF------------QCSICQKTFTHIGSLNTHIRIHSGEKPYKCELCPKAFTQS 322
            ..|:.:|...:..            .|.:|.|||:...:|..|.|.|||||||.|..|.|:|..|
  Rat   308 QPHLSAHFRERDSVRTRLSPEGAVPTCPLCSKTFSCTYTLKRHERTHSGEKPYTCVQCGKSFQYS 372

  Fly   323 SSLMVHMRSHSVRKPHQCVQCDKGFINYSSLLLH-QKTH 360
            .:|..|...|:..|||.|..|::.|.....|..| :|.|
  Rat   373 HNLSRHAVVHTREKPHACRWCERRFTQSGDLYRHVRKFH 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12299NP_609448.1 COG5048 <254..413 CDD:227381 40/120 (33%)
C2H2 Zn finger 256..276 CDD:275368 6/19 (32%)
zf-H2C2_2 268..293 CDD:290200 8/36 (22%)
C2H2 Zn finger 284..304 CDD:275368 8/19 (42%)
zf-H2C2_2 296..321 CDD:290200 14/24 (58%)
zf-C2H2_2 312..>387 CDD:289522 18/50 (36%)
C2H2 Zn finger 312..332 CDD:275368 7/19 (37%)
C2H2 Zn finger 340..360 CDD:275368 6/20 (30%)
C2H2 Zn finger 369..389 CDD:275368
C2H2 Zn finger 397..417 CDD:275368
zf-H2C2_2 409..434 CDD:290200
C2H2 Zn finger 425..445 CDD:275368
zf-H2C2_2 437..462 CDD:290200
C2H2 Zn finger 453..473 CDD:275368
zf-H2C2_2 465..490 CDD:290200
C2H2 Zn finger 481..501 CDD:275368
Zbtb42NP_001119774.1 BTB_POZ_ZBTB42 1..129 CDD:349737
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 174..204 8/33 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 216..248 9/39 (23%)
C2H2 Zn finger 294..314 CDD:275368 6/19 (32%)
COG5048 334..>388 CDD:227381 24/53 (45%)
C2H2 Zn finger 334..354 CDD:275368 8/19 (42%)
zf-H2C2_2 347..369 CDD:404364 13/21 (62%)
C2H2 Zn finger 362..382 CDD:275368 7/19 (37%)
C2H2 Zn finger 390..408 CDD:275368 5/17 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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