DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12299 and ZNF248

DIOPT Version :10

Sequence 1:NP_609448.1 Gene:CG12299 / 34483 FlyBaseID:FBgn0032295 Length:736 Species:Drosophila melanogaster
Sequence 2:NP_066383.1 Gene:ZNF248 / 57209 HGNCID:13041 Length:579 Species:Homo sapiens


Alignment Length:249 Identity:51/249 - (20%)
Similarity:88/249 - (35%) Gaps:82/249 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 PPKVTKAEQFPLPA---QVAKKLEKSGRRGRKDSSSDDESLPETGEGLPTLTTAQIDAILQTIKN 96
            ||.....:.|| ||   .|...||.:            .|......|:||     |..:||    
Human   350 PPDSVPVDSFP-PAPSMAVVAVLEST------------LSCEACKNGMPT-----ISRLLQ---- 392

  Fly    97 NKRLVLLVKNVNFSTAKE---EIAEHFDQAGRVKGVRIPKHRSSGFAFVEMQNADGFQKAFLLDG 158
                :.|..:|..:|:::   :|.....:|.|:....|.|.      .:|.|.            
Human   393 ----MPLFSDVLLTTSEKPQFKIPTKLKEALRIAKECIEKR------LIEEQK------------ 435

  Fly   159 SYLDGRKISVNLSESGNKKSATRIQLLEKKNAEILKLRKNNRKSVKAAE-------------ISL 210
            .....|:::...|..|:::        |:|..:||..:|:.|.:::.:|             ||.
Human   436 QIHQHRRLTRAQSHHGSEE--------ERKKRKILARKKSKRSALENSEEHSAKYSNSNNSGISA 492

  Fly   211 VPDPAKLQKKVPPPDRYLDKP-----KPKKLTKKEVKFVKKQKSLRAKFQNLEK 259
            :|.|..     |||......|     .|.:|:.:.|..:.: .:|.:..||.:|
Human   493 LPPPPP-----PPPPPAAPLPPASTEAPAQLSSQAVNGMSR-GALLSSIQNFQK 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12299NP_609448.1 COG5048 245..>501 CDD:227381 4/15 (27%)
C2H2 Zn finger 256..276 CDD:275368 2/4 (50%)
C2H2 Zn finger 284..304 CDD:275368
zf-H2C2_2 296..321 CDD:463886
C2H2 Zn finger 312..332 CDD:275368
C2H2 Zn finger 340..360 CDD:275368
C2H2 Zn finger 369..389 CDD:275368
C2H2 Zn finger 397..417 CDD:275368
zf-H2C2_2 409..434 CDD:463886
C2H2 Zn finger 425..445 CDD:275368
zf-H2C2_2 437..462 CDD:463886
C2H2 Zn finger 453..473 CDD:275368
C2H2 Zn finger 481..501 CDD:275368
ZNF248NP_066383.1 KRAB 8..68 CDD:214630
C2H2 Zn finger 220..236 CDD:275368
C2H2 Zn finger 244..264 CDD:275368
C2H2 Zn finger 358..374 CDD:275368 7/16 (44%)
C2H2 Zn finger 382..402 CDD:275368 8/32 (25%)
COG5048 406..>472 CDD:227381 16/91 (18%)
C2H2 Zn finger 410..430 CDD:275368 5/25 (20%)
C2H2 Zn finger 438..458 CDD:275368 4/27 (15%)
COG5048 462..>523 CDD:227381 14/65 (22%)
C2H2 Zn finger 466..486 CDD:275368 3/19 (16%)
C2H2 Zn finger 494..514 CDD:275368 6/24 (25%)
zf-H2C2_2 506..529 CDD:463886 4/23 (17%)
C2H2 Zn finger 522..542 CDD:275368 5/20 (25%)
zf-H2C2_2 534..559 CDD:463886 3/7 (43%)
C2H2 Zn finger 550..570 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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