DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12299 and si:ch73-367f21.4

DIOPT Version :9

Sequence 1:NP_609448.1 Gene:CG12299 / 34483 FlyBaseID:FBgn0032295 Length:736 Species:Drosophila melanogaster
Sequence 2:XP_021323881.1 Gene:si:ch73-367f21.4 / 560465 ZFINID:ZDB-GENE-120214-27 Length:1012 Species:Danio rerio


Alignment Length:587 Identity:164/587 - (27%)
Similarity:230/587 - (39%) Gaps:128/587 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 DDDDDDDDSSSSSSSSSNSSSSSSSVPTTSNS-------------NTQQSQESVQPLHGLVAGPG 178
            |..::::|.::...|..:|:..||....|..|             .|.||.||.:.:|       
Zfish     2 DIKEEEEDCATDYQSGMHSTEQSSLKIHTGESGESFTCKQCGEIFTTNQSLESHKVIH------- 59

  Fly   179 YNEFQLQMTDPRESTSIFMVQPTVSVTPLQQLLPPAPTVSPGLGLQSTPIKRRRGRRSNIGAPVM 243
                        ....||                    :....|...|.::..:..|.       
Zfish    60 ------------TGEHIF--------------------ICSECGKSFTQMRYLKNHRK------- 85

  Fly   244 DPALNGNQKCFQCTHCEASFPNAGDLSKHVRSHITNKPFQCSICQKTFTHIGSLNTHIRIHSGEK 308
               ::.....|.|..|:..|.....|..|::.|...|||.|..|.|.|....||..|:|||:|||
Zfish    86 ---IHTGDHPFTCPECDKCFTMKHSLESHLKIHTGEKPFTCPDCGKKFRIKHSLEGHMRIHTGEK 147

  Fly   309 PYKCELCPKAFTQSSSLMVHMRSHSVRKPHQCVQCDKGFINYSSLLLHQKTHIAPTETFICPECE 373
            ||||..|.|.|.:...|..|:..|:..||:.|.:|.:.|.....|..|.|||.. .:.:.|.:|.
Zfish   148 PYKCRECGKNFREKQILDKHLTIHTGEKPYSCPECGRNFRVKKCLENHIKTHTG-EKPYTCQDCG 211

  Fly   374 REFKAEALLDEHMRMHTQELVYQCAICREAFRASSELVQHMKNHMGEKPFTCSLCDRSFTQSGSL 438
            ..|..:..|..|||:||.|..|.|..|..:||...:|..|::.|.|||||:|..|.:||:::.:|
Zfish   212 ISFAVKQNLKRHMRIHTGEKPYSCPECGRSFRVKQDLKSHVRIHTGEKPFSCQQCGKSFSENKTL 276

  Fly   439 NIHMRIHTGEKPFQCKLCDKCFTQASSLSVHMKIHAGEKPYPCPICGKSYSQQAYLNKHIQAH-- 501
            ..|||||||||||.|..|.|.|.:..:|..||::|.|:|||.||.|||||::|..|..||:.|  
Zfish   277 ESHMRIHTGEKPFTCSQCGKNFRRKQNLKSHMRLHTGDKPYSCPQCGKSYNEQKSLENHIRTHTG 341

  Fly   502 -------QMASA-ASASTSPGLLVAKQPHETLVCIVCGSLHADATALASH--VHS-------QHA 549
                   |.... ...||..|.:......:...|..||....:.|.|..|  :||       .|.
Zfish   342 EKPFACDQCGKTFTQQSTLRGHIKIHTGEKPFTCPQCGKSFIERTKLERHKKIHSGEKPFDCHHC 406

  Fly   550 ALLDTMKQSGMNTAPGGAIPDVKCSAEEQQAYVERVQC-----VLQQM-NHQQQHQQHQQQPPQQ 608
            ....|||||          .|:.......:......||     |.|:. :|...|...:....||
Zfish   407 KKSFTMKQS----------LDIHMRIHTGEKLYTCQQCKKSFAVKQKFDSHMTIHTGEKPYTCQQ 461

  Fly   609 ------QQQHPQQQQQQHLQQQP--------------------HQ--MQLPQQPKLPAMDSTGED 645
                  :::......:.|.:::|                    ||  |....||.|..  .|||.
Zfish   462 CGKCFREKRKLVSHMKVHTEEKPAAGVEVVLDQMDIKEDCAPNHQSRMHFTDQPSLKI--HTGES 524

  Fly   646 EE 647
            .|
Zfish   525 GE 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12299NP_609448.1 COG5048 <254..413 CDD:227381 59/158 (37%)
C2H2 Zn finger 256..276 CDD:275368 5/19 (26%)
zf-H2C2_2 268..293 CDD:290200 10/24 (42%)
C2H2 Zn finger 284..304 CDD:275368 8/19 (42%)
zf-H2C2_2 296..321 CDD:290200 16/24 (67%)
zf-C2H2_2 312..>387 CDD:289522 22/74 (30%)
C2H2 Zn finger 312..332 CDD:275368 6/19 (32%)
C2H2 Zn finger 340..360 CDD:275368 6/19 (32%)
C2H2 Zn finger 369..389 CDD:275368 7/19 (37%)
C2H2 Zn finger 397..417 CDD:275368 6/19 (32%)
zf-H2C2_2 409..434 CDD:290200 12/24 (50%)
C2H2 Zn finger 425..445 CDD:275368 8/19 (42%)
zf-H2C2_2 437..462 CDD:290200 16/24 (67%)
C2H2 Zn finger 453..473 CDD:275368 7/19 (37%)
zf-H2C2_2 465..490 CDD:290200 15/24 (63%)
C2H2 Zn finger 481..501 CDD:275368 11/19 (58%)
si:ch73-367f21.4XP_021323881.1 COG5048 16..447 CDD:227381 146/490 (30%)
C2H2 Zn finger 39..59 CDD:275368 5/19 (26%)
C2H2 Zn finger 67..87 CDD:275368 3/29 (10%)
C2H2 Zn finger 95..115 CDD:275368 5/19 (26%)
C2H2 Zn finger 123..143 CDD:275368 8/19 (42%)
C2H2 Zn finger 151..171 CDD:275368 6/19 (32%)
C2H2 Zn finger 179..199 CDD:275368 6/19 (32%)
C2H2 Zn finger 207..227 CDD:275368 7/19 (37%)
C2H2 Zn finger 235..255 CDD:275368 6/19 (32%)
C2H2 Zn finger 263..283 CDD:275368 8/19 (42%)
C2H2 Zn finger 291..311 CDD:275368 7/19 (37%)
COG5048 314..734 CDD:227381 54/225 (24%)
C2H2 Zn finger 319..339 CDD:275368 11/19 (58%)
C2H2 Zn finger 347..367 CDD:275368 4/19 (21%)
C2H2 Zn finger 375..395 CDD:275368 6/19 (32%)
C2H2 Zn finger 403..423 CDD:275368 7/29 (24%)
C2H2 Zn finger 431..451 CDD:275368 5/19 (26%)
C2H2 Zn finger 459..479 CDD:275368 2/19 (11%)
C2H2 Zn finger 530..550 CDD:275368
C2H2 Zn finger 558..578 CDD:275368
COG5048 583..994 CDD:227381
C2H2 Zn finger 586..606 CDD:275368
C2H2 Zn finger 614..634 CDD:275368
C2H2 Zn finger 642..662 CDD:275368
C2H2 Zn finger 670..690 CDD:275368
C2H2 Zn finger 698..718 CDD:275368
C2H2 Zn finger 726..746 CDD:275368
C2H2 Zn finger 754..774 CDD:275368
C2H2 Zn finger 782..802 CDD:275368
C2H2 Zn finger 810..830 CDD:275368
C2H2 Zn finger 838..858 CDD:275368
C2H2 Zn finger 866..886 CDD:275368
C2H2 Zn finger 894..914 CDD:275368
C2H2 Zn finger 922..942 CDD:275368
C2H2 Zn finger 950..970 CDD:275368
C2H2 Zn finger 978..998 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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