DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12299 and si:ch211-222k6.2

DIOPT Version :9

Sequence 1:NP_609448.1 Gene:CG12299 / 34483 FlyBaseID:FBgn0032295 Length:736 Species:Drosophila melanogaster
Sequence 2:NP_001373745.1 Gene:si:ch211-222k6.2 / 556142 ZFINID:ZDB-GENE-030131-9038 Length:364 Species:Danio rerio


Alignment Length:289 Identity:93/289 - (32%)
Similarity:135/289 - (46%) Gaps:63/289 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   247 LNGNQK------CFQCTHCEASFPNAGDLSKHVRSHITNKPFQCSICQKTFTHIGSLNTHIRIHS 305
            ||.:.|      .:.|..|...|.:.|:|::|::||:...||.|..|.|.||:.|:.|.|::||:
Zfish   101 LNEHMKIHTAKMLYTCGQCGTIFTDEGNLNEHMKSHVVEMPFTCGHCGKRFTYKGNFNEHMKIHT 165

  Fly   306 GEKPYKCELCPKAFTQSSSLMVHMRSHSVRKPHQCVQCDKGFINYSSLLLHQKTHIAPTETFICP 370
            ||:||.|:.|.|.||...:|..|:..|:..|||.|.||.|                         
Zfish   166 GERPYACDQCGKRFTHKGNLNKHIIVHTGEKPHSCDQCGK------------------------- 205

  Fly   371 ECEREFKAEALLDEHMRMHTQELVYQCAICREAFRASSELVQHMKNHMGEKPFTCSLCDRSFTQS 435
                :||.:.:|::||::||.|:.|.|..|..:||.......|::.|.|.:||:|..|.:.|..|
Zfish   206 ----KFKLKHILNDHMKIHTGEMPYMCDQCGTSFRKLDTFRLHLRYHSGVRPFSCDQCGKHFFTS 266

  Fly   436 GSLNIHMRIHTGEKPFQCKLCDKCFTQASSLSVHMK----------------------------I 472
            .:|..|:::|...||..|.||.|.|.:.|.|..|.|                            :
Zfish   267 VALKYHVKVHAKVKPHVCSLCGKSFMELSGLKKHQKRHSGVKNHVCFACGNTFFDGAQLKRHQRV 331

  Fly   473 HAGEKPYPCPICGKSYSQQAYLNKHIQAH 501
            |.|||||.||.|.|.:||..:|..|.:.|
Zfish   332 HTGEKPYDCPHCDKRFSQPGHLKTHEKIH 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12299NP_609448.1 COG5048 <254..413 CDD:227381 52/158 (33%)
C2H2 Zn finger 256..276 CDD:275368 6/19 (32%)
zf-H2C2_2 268..293 CDD:290200 10/24 (42%)
C2H2 Zn finger 284..304 CDD:275368 8/19 (42%)
zf-H2C2_2 296..321 CDD:290200 12/24 (50%)
zf-C2H2_2 312..>387 CDD:289522 19/74 (26%)
C2H2 Zn finger 312..332 CDD:275368 7/19 (37%)
C2H2 Zn finger 340..360 CDD:275368 4/19 (21%)
C2H2 Zn finger 369..389 CDD:275368 5/19 (26%)
C2H2 Zn finger 397..417 CDD:275368 5/19 (26%)
zf-H2C2_2 409..434 CDD:290200 8/24 (33%)
C2H2 Zn finger 425..445 CDD:275368 6/19 (32%)
zf-H2C2_2 437..462 CDD:290200 10/24 (42%)
C2H2 Zn finger 453..473 CDD:275368 9/47 (19%)
zf-H2C2_2 465..490 CDD:290200 13/52 (25%)
C2H2 Zn finger 481..501 CDD:275368 8/19 (42%)
si:ch211-222k6.2NP_001373745.1 C2H2 Zn finger 144..164 CDD:275368 8/19 (42%)
C2H2 Zn finger 172..192 CDD:275368 7/19 (37%)
C2H2 Zn finger 200..220 CDD:275368 9/48 (19%)
C2H2 Zn finger 228..248 CDD:275368 5/19 (26%)
C2H2 Zn finger 256..276 CDD:275368 6/19 (32%)
C2H2 Zn finger 284..304 CDD:275368 9/19 (47%)
C2H2 Zn finger 312..332 CDD:275368 0/19 (0%)
C2H2 Zn finger 340..360 CDD:275368 8/19 (42%)
COG5048 37..>362 CDD:227381 93/289 (32%)
C2H2 Zn finger 60..80 CDD:275368
C2H2 Zn finger 88..108 CDD:275368 3/6 (50%)
C2H2 Zn finger 116..136 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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