DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12299 and si:ch73-144d13.7

DIOPT Version :9

Sequence 1:NP_609448.1 Gene:CG12299 / 34483 FlyBaseID:FBgn0032295 Length:736 Species:Drosophila melanogaster
Sequence 2:XP_017206618.1 Gene:si:ch73-144d13.7 / 555336 ZFINID:ZDB-GENE-131127-29 Length:332 Species:Danio rerio


Alignment Length:359 Identity:109/359 - (30%)
Similarity:163/359 - (45%) Gaps:56/359 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 QLQMTDPRESTSIFMV-QPTVSVTPLQQLLPPAPTVSPGLGLQSTPIKRRR----------GRR- 235
            :::..||.|.|.:.:: :.|..:..:::.......::.|.....:..|:.:          ||. 
Zfish    15 EVKHEDPEEQTDLMILKEETQHLNEIEERDLQDDLMNMGKSFSGSKFKKPQKKGNFTCKVCGRSF 79

  Fly   236 SNIGAPVMDPALNGNQKCFQCTHCEASFPNAGDLSKHVRSHITNKPFQCSICQKTFTHIGSLNTH 300
            |..|...:...::..:|.|.|..|..|||....|..|:..|...|||.|..|.|:|.|.|:|.||
Zfish    80 SKKGILKVHMIVHTREKPFTCQQCGQSFPRKESLKIHMNIHTGEKPFTCVHCGKSFAHKGTLYTH 144

  Fly   301 IRIHSGEKPYKCELCPKAFTQSSSLMVHMRSHSVRKPHQCVQCDKGFINYSSLLLHQKTHIAPTE 365
            .:||||||.|.|:||.|...:..:|..|||.|:..||..|.||.|.|....|             
Zfish   145 TKIHSGEKTYSCKLCGKTLNRKGNLQTHMRVHTGEKPFTCAQCPKSFTRKES------------- 196

  Fly   366 TFICPECEREFKAEALLDEHMRMHTQELVYQCAICREAFRASSELVQHMKNHMGEKPFTCSLCDR 430
                            |::||..|.:|..::|..|.|.|....:|..|:..|:|.:...|.||..
Zfish   197 ----------------LNKHMLSHFRESHFKCRQCGETFTDRPQLESHVGAHIGRELLMCRLCGI 245

  Fly   431 SFTQSGSLNIHMRIHTGEKPFQCKLCDKCFTQASSLSVHMKIHAGEKPYPCPICGKSYSQQAYLN 495
            ..|...:|.||||:||||||:.|:.|.|.|::.::|..|.:||.|||||.|..||:|::.:...|
Zfish   246 GCTNKANLKIHMRVHTGEKPYSCQHCGKSFSRPTTLKNHSRIHTGEKPYTCTQCGRSFTHRGNFN 310

  Fly   496 KHIQAHQMASAASASTSPGLLVAKQPHETLVCIV 529
            .|.:.|               ..::|..:|.|.|
Zfish   311 THRRIH---------------TGERPFRSLPCSV 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12299NP_609448.1 COG5048 <254..413 CDD:227381 55/158 (35%)
C2H2 Zn finger 256..276 CDD:275368 7/19 (37%)
zf-H2C2_2 268..293 CDD:290200 10/24 (42%)
C2H2 Zn finger 284..304 CDD:275368 9/19 (47%)
zf-H2C2_2 296..321 CDD:290200 14/24 (58%)
zf-C2H2_2 312..>387 CDD:289522 19/74 (26%)
C2H2 Zn finger 312..332 CDD:275368 8/19 (42%)
C2H2 Zn finger 340..360 CDD:275368 6/19 (32%)
C2H2 Zn finger 369..389 CDD:275368 3/19 (16%)
C2H2 Zn finger 397..417 CDD:275368 6/19 (32%)
zf-H2C2_2 409..434 CDD:290200 7/24 (29%)
C2H2 Zn finger 425..445 CDD:275368 9/19 (47%)
zf-H2C2_2 437..462 CDD:290200 15/24 (63%)
C2H2 Zn finger 453..473 CDD:275368 6/19 (32%)
zf-H2C2_2 465..490 CDD:290200 13/24 (54%)
C2H2 Zn finger 481..501 CDD:275368 6/19 (32%)
si:ch73-144d13.7XP_017206618.1 C2H2 Zn finger 72..92 CDD:275368 4/19 (21%)
C2H2 Zn finger 100..120 CDD:275368 7/19 (37%)
zf-H2C2_2 112..137 CDD:290200 10/24 (42%)
C2H2 Zn finger 128..148 CDD:275368 9/19 (47%)
COG5048 <154..303 CDD:227381 62/177 (35%)
C2H2 Zn finger 156..176 CDD:275368 8/19 (42%)
zf-H2C2_2 168..193 CDD:290200 12/24 (50%)
C2H2 Zn finger 184..204 CDD:275368 9/48 (19%)
C2H2 Zn finger 212..232 CDD:275370 6/19 (32%)
C2H2 Zn finger 240..260 CDD:275368 9/19 (47%)
zf-H2C2_2 252..277 CDD:290200 15/24 (63%)
C2H2 Zn finger 268..288 CDD:275368 6/19 (32%)
zf-H2C2_2 281..305 CDD:290200 13/23 (57%)
C2H2 Zn finger 296..316 CDD:275368 6/19 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595106
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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