DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12299 and znf1162

DIOPT Version :9

Sequence 1:NP_609448.1 Gene:CG12299 / 34483 FlyBaseID:FBgn0032295 Length:736 Species:Drosophila melanogaster
Sequence 2:NP_001012509.2 Gene:znf1162 / 503527 ZFINID:ZDB-GENE-050220-5 Length:334 Species:Danio rerio


Alignment Length:253 Identity:105/253 - (41%)
Similarity:139/253 - (54%) Gaps:11/253 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   252 KCFQCTHCEASFPNAGDLSKHVRSHITNKPFQCSICQKTFTHIGSLNTHIRIHSGEKPYKCELCP 316
            |.|.||.|..||.|...|.:||..|...||:|||.|.|.|...|:|.||.|.|:|||||.|..|.
Zfish    60 KGFTCTQCGKSFKNKHLLKRHVMIHTGEKPYQCSHCDKRFNDSGNLKTHARTHTGEKPYHCTACG 124

  Fly   317 KAFTQSSSLMVHMR-SHS-VRKPHQCVQCDKG-FINYSSLLLHQKTHIAPTETFICPECEREFKA 378
            |:|||||||..|.: :|: :.|..:.....:. .:|:|..:        ..|.:.|..|.:.||.
Zfish   125 KSFTQSSSLRTHTKHNHNLITKEEESEDLSEAKKVNFSVRM--------KEEPYSCSVCGKSFKH 181

  Fly   379 EALLDEHMRMHTQELVYQCAICREAFRASSELVQHMKNHMGEKPFTCSLCDRSFTQSGSLNIHMR 443
            ::.|.:|..:||.|..:.|..|..:|...|.|:|||..|.||||..|..|.|:|.:...|..|..
Zfish   182 QSSLSQHQMIHTGEKPHACIQCGRSFGQLSNLIQHMLIHSGEKPHKCDQCGRTFFRHSHLKNHQS 246

  Fly   444 IHTGEKPFQCKLCDKCFTQASSLSVHMKIHAGEKPYPCPICGKSYSQQAYLNKHIQAH 501
            :||.|||:.|.||.|.||:.||||:|.|||.|.|.:.|..|||::.|..||.:|.:.|
Zfish   247 VHTKEKPYSCALCGKTFTRQSSLSLHEKIHTGVKEHVCFECGKTFFQAGYLKRHQRIH 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12299NP_609448.1 COG5048 <254..413 CDD:227381 60/161 (37%)
C2H2 Zn finger 256..276 CDD:275368 9/19 (47%)
zf-H2C2_2 268..293 CDD:290200 12/24 (50%)
C2H2 Zn finger 284..304 CDD:275368 10/19 (53%)
zf-H2C2_2 296..321 CDD:290200 14/24 (58%)
zf-C2H2_2 312..>387 CDD:289522 22/77 (29%)
C2H2 Zn finger 312..332 CDD:275368 11/20 (55%)
C2H2 Zn finger 340..360 CDD:275368 2/20 (10%)
C2H2 Zn finger 369..389 CDD:275368 6/19 (32%)
C2H2 Zn finger 397..417 CDD:275368 8/19 (42%)
zf-H2C2_2 409..434 CDD:290200 13/24 (54%)
C2H2 Zn finger 425..445 CDD:275368 6/19 (32%)
zf-H2C2_2 437..462 CDD:290200 12/24 (50%)
C2H2 Zn finger 453..473 CDD:275368 12/19 (63%)
zf-H2C2_2 465..490 CDD:290200 13/24 (54%)
C2H2 Zn finger 481..501 CDD:275368 8/19 (42%)
znf1162NP_001012509.2 COG5048 <62..211 CDD:227381 58/156 (37%)
C2H2 Zn finger 64..84 CDD:275368 9/19 (47%)
C2H2 Zn finger 92..112 CDD:275368 10/19 (53%)
C2H2 Zn finger 120..138 CDD:275368 11/17 (65%)
C2H2 Zn finger 172..192 CDD:275368 6/19 (32%)
C2H2 Zn finger 200..220 CDD:275368 8/19 (42%)
COG5048 224..>272 CDD:227381 23/47 (49%)
C2H2 Zn finger 228..248 CDD:275368 6/19 (32%)
C2H2 Zn finger 256..276 CDD:275368 12/19 (63%)
C2H2 Zn finger 284..304 CDD:275368 8/19 (42%)
zf-H2C2_2 296..320 CDD:316026 4/9 (44%)
C2H2 Zn finger 312..332 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
10.960

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