DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12299 and zgc:165514

DIOPT Version :9

Sequence 1:NP_609448.1 Gene:CG12299 / 34483 FlyBaseID:FBgn0032295 Length:736 Species:Drosophila melanogaster
Sequence 2:NP_001092705.1 Gene:zgc:165514 / 449909 ZFINID:ZDB-GENE-041008-169 Length:298 Species:Danio rerio


Alignment Length:244 Identity:88/244 - (36%)
Similarity:132/244 - (54%) Gaps:1/244 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   256 CTHCEASFPNAGDLSKHVRSHITNKPFQCSICQKTFTHIGSLNTHIRIHSGEKPYKCELCPKAFT 320
            |..|..||....:|:.|.::|...||:.|:.|.|:|:.:.:...|.:.|..::.:.|..|.|:||
Zfish    47 CPQCGKSFRRKANLNMHRKTHAGEKPYTCTECGKSFSQLNNYKQHQKTHEDKRDHDCLQCGKSFT 111

  Fly   321 QSSSLMVHMRSHSVRKPHQCVQCDKGFINYSSLLLHQKTHIAPTETFICPECEREFKAEALLDEH 385
            ::..|..|...|:..|||:|..|:|.|.....|.:|::.|.. .:.|.|.:|..:|:..:.|.:|
Zfish   112 RAGGLKRHQMIHTGEKPHKCSYCEKSFSRSGHLRVHERIHTG-EKPFTCTQCGHDFRLSSDLKQH 175

  Fly   386 MRMHTQELVYQCAICREAFRASSELVQHMKNHMGEKPFTCSLCDRSFTQSGSLNIHMRIHTGEKP 450
            ||:||.|..|.|..|.:.|...:...||.|.|..|:...||.|.:||.:...|.||.||||||||
Zfish   176 MRIHTNEKPYACLFCEKRFSRLAHCKQHQKTHTDERDHVCSECGKSFIRVDHLKIHQRIHTGEKP 240

  Fly   451 FQCKLCDKCFTQASSLSVHMKIHAGEKPYPCPICGKSYSQQAYLNKHIQ 499
            .:|..|:|.|.::|.|..|..||.||:.|.||.|.||:.:...|..|::
Zfish   241 HKCSYCEKSFCRSSHLKRHEGIHTGEQRYCCPPCQKSFRRLENLLNHMK 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12299NP_609448.1 COG5048 <254..413 CDD:227381 48/156 (31%)
C2H2 Zn finger 256..276 CDD:275368 6/19 (32%)
zf-H2C2_2 268..293 CDD:290200 9/24 (38%)
C2H2 Zn finger 284..304 CDD:275368 5/19 (26%)
zf-H2C2_2 296..321 CDD:290200 6/24 (25%)
zf-C2H2_2 312..>387 CDD:289522 24/74 (32%)
C2H2 Zn finger 312..332 CDD:275368 7/19 (37%)
C2H2 Zn finger 340..360 CDD:275368 6/19 (32%)
C2H2 Zn finger 369..389 CDD:275368 7/19 (37%)
C2H2 Zn finger 397..417 CDD:275368 6/19 (32%)
zf-H2C2_2 409..434 CDD:290200 10/24 (42%)
C2H2 Zn finger 425..445 CDD:275368 9/19 (47%)
zf-H2C2_2 437..462 CDD:290200 15/24 (63%)
C2H2 Zn finger 453..473 CDD:275368 7/19 (37%)
zf-H2C2_2 465..490 CDD:290200 12/24 (50%)
C2H2 Zn finger 481..501 CDD:275368 7/19 (37%)
zgc:165514NP_001092705.1 C2H2 Zn finger 47..67 CDD:275368 6/19 (32%)
zf-H2C2_2 59..84 CDD:290200 9/24 (38%)
COG5048 <71..259 CDD:227381 68/188 (36%)
C2H2 Zn finger 75..95 CDD:275368 5/19 (26%)
C2H2 Zn finger 103..123 CDD:275368 7/19 (37%)
zf-H2C2_2 116..140 CDD:290200 10/23 (43%)
C2H2 Zn finger 131..151 CDD:275368 6/19 (32%)
C2H2 Zn finger 159..179 CDD:275368 7/19 (37%)
zf-H2C2_2 171..196 CDD:290200 11/24 (46%)
C2H2 Zn finger 187..207 CDD:275368 6/19 (32%)
C2H2 Zn finger 215..235 CDD:275368 9/19 (47%)
zf-H2C2_2 227..250 CDD:290200 14/22 (64%)
C2H2 Zn finger 243..263 CDD:275368 7/19 (37%)
C2H2 Zn finger 271..289 CDD:275368 7/17 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
10.960

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