Protein Alignment CG12299 and Sry-delta

DIOPT Version :10

• Sequence 1: NP_609448.1
• Gene: CG12299 / 34483
• FlyBaseID: FBgn0032295
• Length: 736
• Species: Drosophila melanogaster
• Sequence 2: NP_524581.1
• Gene: Sry-delta / 43572
• FlyBaseID: FBgn0003512
• Length: 433
• Species: Drosophila melanogaster
• Alignment Length: 479
• Identity: 89/479 - (18%)
• Similarity: 146/479 - (30%)
• Gaps: 166/479 - (34%)

  Fly    79 QQEQESPGDESEDYSWIFEPVCELAEDGSDSSDGSASSGSDSSSSSDDDDDDD---DDDSSSSSS 140
            |.:.|:..|...|..::     ||.:|..:|.........|.....||||||:   :|.....|.
  Fly   115 QSDVETDADAEADALFV-----ELVKDQEESDTEIKREFVDEEEEEDDDDDDEFICEDVDVGDSE 174

  Fly   141 SSSNSSSSSSSVPTTSNSNTQQSQESVQPLHGLVAGPGYNEFQLQMTDPRESTSIFMVQPTVSVT 205
            :....||.....||
  Fly   175 ALYGKSSDGEDRPT--------------------------------------------------- 188

  Fly   206 PLQQLLPPAPTVSPGLGLQSTPIKRRRGRRSNIGAPVMDPALNGNQKCFQCTHCEASFPNAGDLS 270
                                    ::|.::                   :||.|...:.:...|.
  Fly   189 ------------------------KKRVKQ-------------------ECTTCGKVYNSWYQLQ 210

  Fly   271 KHVRSHITNKPFQ-CSICQKTFTHIGSLNTHIRIHSGEKPYKCELCPKAFTQSSSLMVHMRSHSV 334
            ||:....:.:|.. |.||.........|..|:.:|.|:...:|..|||:|::..:.:.|||.|..
  Fly   211 KHISEEHSKQPNHICPICGVIRRDEEYLELHMNLHEGKTEKQCRYCPKSFSRPVNTLRHMRMHWD 275

  Fly   335 RKPHQCVQCDKGFINYSSLLLHQKTHIAPTETFICPECEREFKAEALLDEHMRMHTQELVYQCAI 399
            :|.:|                             |.:|...|..:.||..|...|..|
  Fly   276 KKKYQ-----------------------------CEKCGLRFSQDNLLYNHRLRHEAE------- 304

  Fly   400 CREAFRASSELVQHMKNHMGEKPFTCSLCDRSFTQSGSLNIHMRIHTGEKP-FQCKLCDKCFTQA 463
                                |.|..||:|:.||....:.|.|..||...:| ..|.:|.|.||:.
  Fly   305 --------------------ENPIICSICNVSFKSRKTFNHHTLIHKENRPRHYCSVCPKSFTER 349

  Fly   464 SSLSVHMKIHAGEKPYPCPICGKSYSQQAYLNKHIQAHQMASAASASTSPGLLVAKQPHETLVCI 528
            .:|.:|||.|.|:..|.......:..||.....|:...:..:|.:      ::::.....:..|:
  Fly   350 YTLKMHMKTHEGDVVYGVREEAPADEQQVVEELHVDVDESEAAVT------VIMSDNDENSGFCL 408

  Fly   529 VCGSLHADATALASHVHSQHAALL 552
            :|.:...:...|..|:...|..:|
  Fly   409 ICNTNFENKKELEHHLQFDHDVVL 432

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12299	NP_609448.1	COG5048	245..>501	CDD:227381	60/257 (23%)
		C2H2 Zn finger	256..276	CDD:275368	6/19 (32%)
		C2H2 Zn finger	284..304	CDD:275368	5/19 (26%)
		zf-H2C2_2	296..321	CDD:463886	9/24 (38%)
		C2H2 Zn finger	312..332	CDD:275368	8/19 (42%)
		C2H2 Zn finger	340..360	CDD:275368	0/19 (0%)
		C2H2 Zn finger	369..389	CDD:275368	6/19 (32%)
		C2H2 Zn finger	397..417	CDD:275368	0/19 (0%)
		zf-H2C2_2	409..434	CDD:463886	7/24 (29%)
		C2H2 Zn finger	425..445	CDD:275368	7/19 (37%)
		zf-H2C2_2	437..462	CDD:463886	9/25 (36%)
		C2H2 Zn finger	453..473	CDD:275368	9/19 (47%)
		C2H2 Zn finger	481..501	CDD:275368	3/19 (16%)
Sry-delta	NP_524581.1	COG5048	<205..360	CDD:227381	51/210 (24%)
		C2H2 Zn finger	225..245	CDD:275368	5/19 (26%)
		C2H2 Zn finger	253..273	CDD:275368	8/19 (42%)
		C2H2 Zn finger	281..301	CDD:275368	6/19 (32%)
		C2H2 Zn finger	310..327	CDD:275370	6/16 (38%)
		C2H2 Zn finger	339..359	CDD:275368	9/19 (47%)