Protein Alignment CG12299 and Sry-beta

DIOPT Version :10

• Sequence 1: NP_609448.1
• Gene: CG12299 / 34483
• FlyBaseID: FBgn0032295
• Length: 736
• Species: Drosophila melanogaster
• Sequence 2: NP_524579.1
• Gene: Sry-beta / 43570
• FlyBaseID: FBgn0003511
• Length: 356
• Species: Drosophila melanogaster
• Alignment Length: 279
• Identity: 59/279 - (21%)
• Similarity: 111/279 - (39%)
• Gaps: 45/279 - (16%)

  Fly   229 KRRRGRRSNIGAPVMDPALNGNQKCFQCTHCEASFPNAG---DLSKHVRSHITNKPFQCSICQKT 290
            |::..:|:.:..|..        |..|.|..:......|   :..:.::..:.::.||.|   :.
  Fly   100 KQQAAKRARVQVPAF--------KIVQATALKEPERQPGEEDECEEFMKEEMLDEEFQFS---EP 153

  Fly   291 FTHIGSLNTHIRIHSGEKPYKCELCPKAFTQSSSLMVHMRSHSVRKPHQCVQCDKGFINYSSLLL 355
            ...:.|........:.|.|  |.:|.:.|:....|..|:::.:.:|..|..
  Fly   154 DDSMPSSEEEFFTETTEIP--CHICGEMFSSQEVLERHIKADTCQKSEQAT-------------- 202

  Fly   356 HQKTHIAPTETFICPECEREFKAEALLDEHMRMHTQELVYQCAICREAFRASSELVQHMKNHMGE 420
                         |..|..:.|.:.:||.||.:|..:...:|..|.:.|.....:::||:.|..:
  Fly   203 -------------CNVCGLKVKDDEVLDLHMNLHEGKTELECRYCDKKFSHKRNVLRHMEVHWDK 254

  Fly   421 KPFTCSLCDRSFTQSGSLNIHMRIHTGEK-PFQCKLCDKCFTQASSLSVHMKIHAGEKP-YPCPI 483
            |.:.|..|...|:.|..:..|:..|..|: ...|::|.:.|....:...|::.|..::| ||||.
  Fly   255 KKYQCDKCGERFSLSWLMYNHLMRHDAEENALICEVCHQQFKTKRTYKHHLRTHQTDRPRYPCPD 319

  Fly   484 CGKSYSQQAYLNKHIQAHQ 502
            |.||:..:..|..|.:.||
  Fly   320 CEKSFVDKYTLKVHKRVHQ 338

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12299	NP_609448.1	COG5048	245..>501	CDD:227381	54/260 (21%)
		C2H2 Zn finger	256..276	CDD:275368	2/22 (9%)
		C2H2 Zn finger	284..304	CDD:275368	2/19 (11%)
		zf-H2C2_2	296..321	CDD:463886	6/24 (25%)
		C2H2 Zn finger	312..332	CDD:275368	5/19 (26%)
		C2H2 Zn finger	340..360	CDD:275368	0/19 (0%)
		C2H2 Zn finger	369..389	CDD:275368	7/19 (37%)
		C2H2 Zn finger	397..417	CDD:275368	5/19 (26%)
		zf-H2C2_2	409..434	CDD:463886	7/24 (29%)
		C2H2 Zn finger	425..445	CDD:275368	5/19 (26%)
		zf-H2C2_2	437..462	CDD:463886	6/25 (24%)
		C2H2 Zn finger	453..473	CDD:275368	4/19 (21%)
		C2H2 Zn finger	481..501	CDD:275368	7/19 (37%)
Sry-beta	NP_524579.1	C2H2 Zn finger	203..223	CDD:275368	7/19 (37%)
		C2H2 Zn finger	231..251	CDD:275368	5/19 (26%)
		C2H2 Zn finger	259..308	CDD:275368	11/48 (23%)
		C2H2 Zn finger	288..303	CDD:275370	3/14 (21%)
		zf-C2H2	315..337	CDD:395048	9/21 (43%)
		C2H2 Zn finger	317..337	CDD:275368	7/19 (37%)