DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12299 and CG31224

DIOPT Version :10

Sequence 1:NP_609448.1 Gene:CG12299 / 34483 FlyBaseID:FBgn0032295 Length:736 Species:Drosophila melanogaster
Sequence 2:NP_732361.1 Gene:CG31224 / 42237 FlyBaseID:FBgn0051224 Length:1784 Species:Drosophila melanogaster


Alignment Length:600 Identity:135/600 - (22%)
Similarity:201/600 - (33%) Gaps:182/600 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 PILQQTHLLPQQAPNPPQQQPQQPQPPDLTFHCMCCAEFFVHPLALYQHMNTLHPHEPGNG---- 78
            ||...:....:.|........::||...| :.|..|...|........||...|.:...|.    
  Fly  1241 PIASTSRAAAEAAAEAAALAQRKPQRRKL-YKCPHCEAIFEKLKERNAHMIGEHNYVRQNRRLIC 1304

  Fly    79 ------------QQEQESPGDESEDYS----WIFEPVCELAEDGSDSSDGSA----SSGSDSSSS 123
                        ||:......|.||..    .|.:..|:..:|.....|.|.    ...|:....
  Fly  1305 TQPQINTSMLTLQQQMIVQSGEVEDSKDGIVKIKQEQCQEKQDVEQMHDHSELLADVKDSELMGI 1369

  Fly   124 SDDDDDDDDDDSSSSSSSSSNSSSSSSSVPTTSNSNTQQSQESVQPLHGLVAGPGYNEFQLQMTD 188
            ..|.|.|.|||                                ::|       |  |:...:.|.
  Fly  1370 GGDGDGDVDDD--------------------------------IKP-------P--NQLDEKPTL 1393

  Fly   189 PRESTSIFMVQPTVSVTPLQQLLPPAPTVSPGLGLQSTPIKRRRGRRSNIGAPVMDPALNGNQKC 253
            |    .:.|..|...:..|.::|         :....:.:.:.|...|.:....|:.::      
  Fly  1394 P----PLAMTTPAAKLAALYRML---------IAYNESKLGQERNNLSELEQKAMEKSI------ 1439

  Fly   254 FQCTHCEASFPNAGDLSKHVRSHITNKPFQCSICQKTFTHIGSLNTHIRIHSGEKPYKCELCPKA 318
            |.|..|...||:.    |...:|:|..|.:|..|.|.|....:.:.|::.|.|.|.:.|.:|.|.
  Fly  1440 FLCYVCRTDFPSV----KLYDAHLTEHPAECFTCGKKFYRWKNFSLHLKRHLGWKEFGCYVCDKK 1500

  Fly   319 FTQSSSLMVHMRSHSVRKPHQCVQCDKGFINYSSLLLHQKTH----------------IAPT--- 364
            |...|:|:.|||.|:.:.|.:|..|.|.|..||:|..|:|.|                :.|:   
  Fly  1501 FVVRSALVEHMRMHTGQTPLKCKICGKKFKRYSNLTQHRKRHTKMMVRKKEYVCHCGEVLPSKAR 1565

  Fly   365 -------------------------------------------ETFICPECEREFKAEALLDEHM 386
                                                       |...||.|::.| |:..:..||
  Fly  1566 FLWHKETHDLKPKCCPYCCDRFVHANSLRRHIRLAHSDKFDYAEPMECPMCKQIF-AKTSIKAHM 1629

  Fly   387 RMHTQELVYQCAICREAFRASSELVQH--------------------------MKNHMGE----K 421
            ..|:.|..|.||||.::|.....|..|                          .|||:..    |
  Fly  1630 ATHSTEPQYDCAICSKSFSTKWNLKIHSWVHANRTAKPFKCEYCPKAFVRELDFKNHINAHKQIK 1694

  Fly   422 PFTCSLCDRSFTQSGSLNIHMRIHTGEKPFQCKLCDKCFTQASSLSVHMKIHAGEKPYPCPICGK 486
            |:||..|...|.:..:...|.|.|.|.|.|.|..|||.|.:...|..|.::|.||:|:.|.||||
  Fly  1695 PYTCEYCGCKFIRKYNYMRHRREHHGTKKFTCDQCDKSFHRHYYLIEHRRMHTGERPFTCTICGK 1759

  Fly   487 SYSQQAYLNKHIQAH 501
            |.:.:...|||::.|
  Fly  1760 SSTTKTNHNKHLKIH 1774

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12299NP_609448.1 COG5048 245..>501 CDD:227381 92/347 (27%)
C2H2 Zn finger 256..276 CDD:275368 5/19 (26%)
C2H2 Zn finger 284..304 CDD:275368 5/19 (26%)
zf-H2C2_2 296..321 CDD:463886 8/24 (33%)
C2H2 Zn finger 312..332 CDD:275368 9/19 (47%)
C2H2 Zn finger 340..360 CDD:275368 9/19 (47%)
C2H2 Zn finger 369..389 CDD:275368 7/19 (37%)
C2H2 Zn finger 397..417 CDD:275368 8/45 (18%)
zf-H2C2_2 409..434 CDD:463886 11/54 (20%)
C2H2 Zn finger 425..445 CDD:275368 5/19 (26%)
zf-H2C2_2 437..462 CDD:463886 11/24 (46%)
C2H2 Zn finger 453..473 CDD:275368 7/19 (37%)
C2H2 Zn finger 481..501 CDD:275368 9/19 (47%)
CG31224NP_732361.1 C2H2 Zn finger 1466..1486 CDD:275368 5/19 (26%)
C2H2 Zn finger 1494..1514 CDD:275368 9/19 (47%)
zf-H2C2_2 1506..1531 CDD:463886 10/24 (42%)
C2H2 Zn finger 1522..1542 CDD:275368 9/19 (47%)
PHA00733 1527..1623 CDD:177301 15/96 (16%)
C2H2 Zn finger 1554..1573 CDD:275370 1/18 (6%)
C2H2 Zn finger 1580..1599 CDD:275368 0/18 (0%)
C2H2 Zn finger 1613..1632 CDD:275368 7/19 (37%)
COG5048 <1637..1780 CDD:227381 43/137 (31%)
C2H2 Zn finger 1640..1660 CDD:275368 7/19 (37%)
C2H2 Zn finger 1670..1690 CDD:275368 3/19 (16%)
C2H2 Zn finger 1698..1718 CDD:275368 5/19 (26%)
zf-H2C2_2 1710..1733 CDD:463886 10/22 (45%)
C2H2 Zn finger 1726..1746 CDD:275368 7/19 (37%)
C2H2 Zn finger 1754..1774 CDD:275368 9/19 (47%)

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