DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12299 and CG6654

DIOPT Version :10

Sequence 1:NP_609448.1 Gene:CG12299 / 34483 FlyBaseID:FBgn0032295 Length:736 Species:Drosophila melanogaster
Sequence 2:NP_650429.1 Gene:CG6654 / 41831 FlyBaseID:FBgn0038301 Length:639 Species:Drosophila melanogaster


Alignment Length:507 Identity:136/507 - (26%)
Similarity:200/507 - (39%) Gaps:137/507 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 PHEP------------GNGQQEQE---------SPGDESEDYSWIFEPVCELAEDGSDSSDGSAS 115
            |.||            ||.:.|:|         ..||:.|....|.|  |.||     ..:|.  
  Fly   158 PDEPVEKTTSLILQVQGNLKDEKEVVFTQTNVIYEGDDHELEQQIRE--CNLA-----IFEGV-- 213

  Fly   116 SGSDSSSSSDDDDDDDDDDSSSSSSSSSNSSSSSSSVPTTSNSNTQQ----SQESVQPLHGLVAG 176
                          |::.:..:.::....:..|::.:.|...::..|    |:|..:.|      
  Fly   214 --------------DNEAEIITVTAPQVTTRKSAAKLLTQQENDKHQTPVGSKEEAREL------ 258

  Fly   177 PGYNEFQLQMTDPRESTSIFMVQPTVSVTP--------------LQQLL--PPAPTV---SPGLG 222
               .:.|:..:..|.|....:|:..|..||              .|:.|  |.|.||   |...|
  Fly   259 ---EKEQVPQSAKRTSRRRGVVKQDVPATPPSDAEPSPKQHRLGTQRKLSAPRAGTVNGPSTTSG 320

  Fly   223 LQSTPIKRRRGRRSNIGAPV---------MDPALNGNQKCFQC---------------THCEASF 263
            ..:||..:....|.|.|..|         ....:|.|.||.:|               :|...:.
  Fly   321 AATTPELKYHCDRCNAGFAVEKSLMIHRRQKGCINRNYKCNECEKVFVSPDHLAEHQASHGAHNC 385

  Fly   264 PNAG-------DLSKH-VRSHITNKPFQCSICQKTFTHIGSLNTHIRIHSGEKPYKCELCPKAFT 320
            |..|       .|||| |:.|..|...||:||||.||.:.:|..|:|||:||||:.|.:|.|:||
  Fly   386 PECGIRCDSKEALSKHMVQGHKRNLRNQCNICQKVFTMLSTLRDHMRIHTGEKPFVCNICGKSFT 450

  Fly   321 QSSSLMVHMRSHSVRKPHQCVQCDKGFINYSSLLLHQKTHIAPTETFICPECEREFKAEALLDEH 385
            |:::|..|...||                             .|::|.|..|...|..:|.|..|
  Fly   451 QNANLRQHKLRHS-----------------------------ETKSFKCELCPHSFVTKAELTSH 486

  Fly   386 MRMHTQELVYQCAICREAFRASSELVQHMKNHMGEKPFTCSLCDRSFTQSGSLNIHMRIHTGEKP 450
            .|.||.:..::|.:|...|..|..|.:|.:.|.||:|:.|.||...||....|..|.|.||||:|
  Fly   487 ARTHTGDKPFECEVCLARFTTSCSLAKHKRKHTGERPYACDLCPMRFTALNVLKNHRRTHTGERP 551

  Fly   451 FQCKLCDKCFTQASSLSVHMKIHAGEKPYPCPICGKSYSQQAYLNKHIQAHQ 502
            :.|..|.|.|||.....:|.:.|.||:.|.||:|.:.:.....:..|:..|:
  Fly   552 YVCPFCSKTFTQRGDCQMHQRTHQGERIYICPVCNEEFKSMPEMRSHLAGHE 603

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12299NP_609448.1 COG5048 245..>501 CDD:227381 91/278 (33%)
C2H2 Zn finger 256..276 CDD:275368 9/42 (21%)
C2H2 Zn finger 284..304 CDD:275368 10/19 (53%)
zf-H2C2_2 296..321 CDD:463886 13/24 (54%)
C2H2 Zn finger 312..332 CDD:275368 8/19 (42%)
C2H2 Zn finger 340..360 CDD:275368 0/19 (0%)
C2H2 Zn finger 369..389 CDD:275368 7/19 (37%)
C2H2 Zn finger 397..417 CDD:275368 6/19 (32%)
zf-H2C2_2 409..434 CDD:463886 10/24 (42%)
C2H2 Zn finger 425..445 CDD:275368 8/19 (42%)
zf-H2C2_2 437..462 CDD:463886 12/24 (50%)
C2H2 Zn finger 453..473 CDD:275368 7/19 (37%)
C2H2 Zn finger 481..501 CDD:275368 4/19 (21%)
CG6654NP_650429.1 zf-AD 6..78 CDD:214871
C2H2 Zn finger 331..354 CDD:275368 4/22 (18%)
COG5048 <357..570 CDD:227381 81/241 (34%)
C2H2 Zn finger 360..380 CDD:275368 2/19 (11%)
C2H2 Zn finger 385..406 CDD:275370 7/20 (35%)
C2H2 Zn finger 414..434 CDD:275368 10/19 (53%)
C2H2 Zn finger 442..490 CDD:275368 19/76 (25%)
C2H2 Zn finger 470..487 CDD:275368 5/16 (31%)
C2H2 Zn finger 498..518 CDD:275368 6/19 (32%)
C2H2 Zn finger 526..546 CDD:275368 8/19 (42%)
C2H2 Zn finger 554..574 CDD:275368 7/19 (37%)
C2H2 Zn finger 582..602 CDD:275368 4/19 (21%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.