DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12299 and CG7987

DIOPT Version :10

Sequence 1:NP_609448.1 Gene:CG12299 / 34483 FlyBaseID:FBgn0032295 Length:736 Species:Drosophila melanogaster
Sequence 2:NP_650375.1 Gene:CG7987 / 41768 FlyBaseID:FBgn0038244 Length:1283 Species:Drosophila melanogaster


Alignment Length:858 Identity:178/858 - (20%)
Similarity:278/858 - (32%) Gaps:321/858 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 QPQPPDLTFHCMCCAEFFVHPLALYQHM---NTLHPHEPGNGQQEQESPGDESEDYSWIFEPVCE 101
            :|.|      |..|:..|.....|..||   ....||                         :|:
  Fly   138 RPYP------CDFCSRRFRKKATLNNHMLAHQNDRPH-------------------------LCK 171

  Fly   102 L--------------------AEDGSDSSDGSASSGSDSSSSSDDDDDDDDDDSSSSSSSSSNSS 146
            |                    |:|.:|:...:|::.|.|:...:.......||           .
  Fly   172 LCGARFSRRAELISHFKAHAEAQDAADAEAAAAAADSSSAIKFEHQTQRQLDD-----------H 225

  Fly   147 SSSSSVPTTSNSNTQQ-SQESVQPLHGLVAGPGY----------------NEFQLQMTDPRESTS 194
            ......|...:...|: :|::|...|.:|...|.                :..::....|:|.:|
  Fly   226 YYEQEWPLFQHQQEQENAQQNVHQQHQIVEEGGIQLVASYPDTVAQPAAPSRGRISRLKPKEESS 290

  Fly   195 IFMVQPTVSVTPLQQLLPPAP-----TVSPGLGLQSTPIKRRRGRRSNIGAPVMDPALNGNQKCF 254
            .|:|....||...:..:.|.|     |.|..:.::..|       :.|.  ||:|     :.|.|
  Fly   291 QFIVISDKSVEDSRPYMEPEPAQPVVTTSEFIAVEPPP-------QPNF--PVLD-----HSKPF 341

  Fly   255 QCTHCEASFPNAGDLSKHVRSHITNKPFQCSICQKTF-----------TH--------------- 293
            .|..|..:|.....|..|.::|..:.||:|:.||:.|           ||               
  Fly   342 VCQQCGLAFAREKALVSHTKNHRVDSPFECNQCQEMFWDNSSLQEHQKTHQFEESNSEYDPASAE 406

  Fly   294 ----------------------------------------------IGS---------------- 296
                                                          :||                
  Fly   407 ESGSESEADEQLYGEFYCNECGISFHRQDLLRRHAKMHCKPSDQAAVGSNSDVTAGGDVELAKDS 471

  Fly   297 ----LNT-------------HIRIHSGEKPYKCELCPKAFTQSSSLM--VHMRSHSVRKPHQCVQ 342
                .||             |..||:...|:||.||..:|.:..::.  :|.|..|....:.||.
  Fly   472 SGHCCNTCGKSFPSALEMLAHAEIHARFPPFKCVLCGISFYEEQAIKRHLHTRHPSELNANSCVL 536

  Fly   343 CDKGFINYSSLLLHQKTHIAPTETFICPECEREFKAEALLDEHMRMHTQELVYQCAICREAFRAS 407
            |.|...:..:|:.|...| :..:...|.:|.:.|..:|.|..||..|..:.|. |.:|:|.|...
  Fly   537 CGKECRDRKALIKHAWDH-SREKCHSCSKCGKNFHNKARLKRHMASHRDKSVV-CEVCQEEFPDG 599

  Fly   408 SELVQHMKNHMGEKP---FTCSLCDRSFTQSGSLNIHMRIHTGEKPFQCKLCDKCFTQASSLSVH 469
            ..|..|..:|....|   |.|..|.::|....|..||:||||||:|:.|:.|.|.|....:|..|
  Fly   600 RTLSNHRHSHSTTTPGKLFPCLECGKTFGSRSSQQIHVRIHTGERPYGCRYCWKAFADGGTLRKH 664

  Fly   470 MKIHAGEKPYPCPICGKSYSQQAYLNKHIQAHQMASAASASTSPGLLVAKQPHETLVCIVCGSLH 534
            .:||.|||||.|.:|.::::|:..|.:||::|.          .||.||:   .|..|.||....
  Fly   665 ERIHTGEKPYACSVCPRAFNQRVVLREHIRSHH----------SGLDVAR---NTYHCTVCSEDL 716

  Fly   535 ADATALASHVHSQHAALLDTMKQSGMNTAPGGAIPDVKCSAEEQQAYVERVQCVLQQMNHQQQHQ 599
            |.:..|..|:          ::.|..|||                                    
  Fly   717 ASSNDLIQHL----------IQHSDSNTA------------------------------------ 735

  Fly   600 QHQQQPPQQQQQHPQQQQQQHLQQQPHQMQLPQQPKLPAMDSTGEDEEEP--------------- 649
             .|:||....:::.:::     :.|||::...:    .|......||||.               
  Fly   736 -KQRQPVTGPRKYKRRR-----KLQPHEIAHMR----AANKHVNGDEEEAIGEGDAEECASDIDF 790

  Fly   650 ------------DEAEEPPDEEEEQDEPEEPAEVK--TEVLAAEDA----LTNPGYPILGLQ--- 693
                        |.||.|..|:.::......|:.|  |...||:.|    ...|.|.....|   
  Fly   791 CDFDVENVDDIFDMAESPKKEKRKRGSAATKADAKPVTNGKAAKPAQDKGKAKPRYDSTSSQQSD 855

  Fly   694 ---EEQILLDSDM 703
               ||:.|.||.:
  Fly   856 RLWEEKFLHDSQV 868

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12299NP_609448.1 COG5048 245..>501 CDD:227381 89/365 (24%)
C2H2 Zn finger 256..276 CDD:275368 5/19 (26%)
C2H2 Zn finger 284..304 CDD:275368 11/124 (9%)
zf-H2C2_2 296..321 CDD:463886 12/57 (21%)
C2H2 Zn finger 312..332 CDD:275368 6/21 (29%)
C2H2 Zn finger 340..360 CDD:275368 6/19 (32%)
C2H2 Zn finger 369..389 CDD:275368 7/19 (37%)
C2H2 Zn finger 397..417 CDD:275368 6/19 (32%)
zf-H2C2_2 409..434 CDD:463886 8/27 (30%)
C2H2 Zn finger 425..445 CDD:275368 7/19 (37%)
zf-H2C2_2 437..462 CDD:463886 14/24 (58%)
C2H2 Zn finger 453..473 CDD:275368 6/19 (32%)
C2H2 Zn finger 481..501 CDD:275368 6/19 (32%)
CG7987NP_650375.1 C2H2 Zn finger 142..162 CDD:275368 6/19 (32%)
C2H2 Zn finger 170..186 CDD:275368 2/15 (13%)
COG5048 326..734 CDD:227381 107/446 (24%)
C2H2 Zn finger 343..363 CDD:275368 5/19 (26%)
C2H2 Zn finger 371..391 CDD:275368 4/19 (21%)
C2H2 Zn finger 424..444 CDD:275368 0/19 (0%)
zf-C2H2_8 427..522 CDD:464935 13/94 (14%)
C2H2 Zn finger 476..496 CDD:275368 3/19 (16%)
C2H2 Zn finger 504..523 CDD:275368 4/18 (22%)
C2H2 Zn finger 534..554 CDD:275370 6/19 (32%)
C2H2 Zn finger 562..582 CDD:275370 7/19 (37%)
C2H2 Zn finger 589..609 CDD:275368 6/19 (32%)
C2H2 Zn finger 620..640 CDD:275368 7/19 (37%)
C2H2 Zn finger 648..668 CDD:275368 6/19 (32%)
zf-H2C2_2 661..685 CDD:463886 11/23 (48%)
C2H2 Zn finger 676..696 CDD:275368 6/19 (32%)
C2H2 Zn finger 709..726 CDD:275371 5/16 (31%)

Return to query results.
Submit another query.