DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12299 and CG3281

DIOPT Version :10

Sequence 1:NP_609448.1 Gene:CG12299 / 34483 FlyBaseID:FBgn0032295 Length:736 Species:Drosophila melanogaster
Sequence 2:NP_650132.1 Gene:CG3281 / 41445 FlyBaseID:FBgn0260741 Length:538 Species:Drosophila melanogaster


Alignment Length:427 Identity:109/427 - (25%)
Similarity:168/427 - (39%) Gaps:114/427 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   249 GNQKCFQCTHCEASFP--NAGDLSKHVRSHITNKPFQCSICQKTFTHIGSLNTHIRIHSGEKPYK 311
            |:|.|...|......|  .:.|...........||....|..:..:....|.:.:. ||....||
  Fly   141 GDQDCSAFTSDVGEEPLYASEDRDDEPEDSFQLKPRPDEIENRELSRPSQLGSRLN-HSANFIYK 204

  Fly   312 CELCPKAFTQSSSLMVHM-RSH-------SVRKPHQ--------CVQCDKGFINYSSLLLH-QKT 359
            |.:||:.|.:|.||..|. ::|       :::..::        |..|.:.|....:|..| |..
  Fly   205 CAVCPRVFAKSESLTRHFSQAHKLTADVAAMKLANESCGTGLLTCEHCPRTFKRQDTLRRHMQAF 269

  Fly   360 H-----IAPTETF------------ICPECEREFKAEALLDEHMRMHTQELVYQCAICREAFRAS 407
            |     :.|.||.            .||.|...|...: |..|:|.||.:..|:|..|.:||..|
  Fly   270 HPDAIALEPEETTDNSARKRIAKRRDCPHCGLSFPVSS-LTIHIRRHTGDNPYKCDQCEKAFPRS 333

  Fly   408 SELVQHMKNHMGEKPFTCSLCDRSFTQSGSLNIHMRIHTGEKPFQCKLCDKCFTQASSLSVHMKI 472
            .:|..||:.|.||:|..|.:|.:.|.....|..|||:|||::|:.||:|.|.|.|::.|.:||:.
  Fly   334 QDLSLHMRQHTGERPSECKICSKKFISQNKLARHMRLHTGQRPYSCKMCSKSFVQSNDLKIHMRR 398

  Fly   473 HAGEKPYPCPICGKSYSQQAYLNKHIQAHQMASAASASTSPGLLVAKQPHETLVCIVCGSLHADA 537
            |.||:||.|.:||:|:...::||.|            ....|.|:|..|                
  Fly   399 HTGERPYQCGVCGESFVCGSHLNIH------------RNRKGHLIAVIP---------------- 435

  Fly   538 TALASHVHSQHAALLDTMKQSGMNTAPGGAIPDVKCSAEEQQAYVERVQCVLQQMNHQQQHQQHQ 602
               .:.|.:..||  |....:.:|              :.:...:||::.               
  Fly   436 ---GNEVEANFAA--DPYVNARVN--------------QRRSEDIERMRL--------------- 466

  Fly   603 QQPPQQQQQHPQQQQQQHLQQQPHQMQLPQQPKLPAM 639
                   |:.|:.|.||.|:..|       :|.:|||
  Fly   467 -------QRIPENQLQQRLENLP-------KPDVPAM 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12299NP_609448.1 COG5048 245..>501 CDD:227381 87/287 (30%)
C2H2 Zn finger 256..276 CDD:275368 3/21 (14%)
C2H2 Zn finger 284..304 CDD:275368 2/19 (11%)
zf-H2C2_2 296..321 CDD:463886 9/24 (38%)
C2H2 Zn finger 312..332 CDD:275368 8/20 (40%)
C2H2 Zn finger 340..360 CDD:275368 6/20 (30%)
C2H2 Zn finger 369..389 CDD:275368 7/19 (37%)
C2H2 Zn finger 397..417 CDD:275368 8/19 (42%)
zf-H2C2_2 409..434 CDD:463886 10/24 (42%)
C2H2 Zn finger 425..445 CDD:275368 7/19 (37%)
zf-H2C2_2 437..462 CDD:463886 13/24 (54%)
C2H2 Zn finger 453..473 CDD:275368 9/19 (47%)
C2H2 Zn finger 481..501 CDD:275368 7/19 (37%)
CG3281NP_650132.1 zf-AD 15..91 CDD:214871
C2H2 Zn finger 205..226 CDD:275368 8/20 (40%)
C2H2 Zn finger 249..266 CDD:275368 4/16 (25%)
COG5048 <294..>391 CDD:227381 39/97 (40%)
C2H2 Zn finger 296..315 CDD:275368 7/19 (37%)
C2H2 Zn finger 323..343 CDD:275368 8/19 (42%)
C2H2 Zn finger 351..371 CDD:275368 7/19 (37%)
zf-H2C2_2 364..388 CDD:463886 13/23 (57%)
C2H2 Zn finger 379..399 CDD:275368 9/19 (47%)
zf-H2C2_2 391..416 CDD:463886 12/24 (50%)
C2H2 Zn finger 407..424 CDD:275368 7/28 (25%)
Blue background indicates that the domain is not in the aligned region.

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