DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12299 and CG11247

DIOPT Version :10

Sequence 1:NP_609448.1 Gene:CG12299 / 34483 FlyBaseID:FBgn0032295 Length:736 Species:Drosophila melanogaster
Sequence 2:NP_649351.2 Gene:CG11247 / 40414 FlyBaseID:FBgn0037120 Length:522 Species:Drosophila melanogaster


Alignment Length:414 Identity:118/414 - (28%)
Similarity:189/414 - (45%) Gaps:59/414 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   227 PIKRRR----------GRRSNIGAPVMDPALNGNQKCFQCTHCEASFPNAGDLSKHV-RSHITNK 280
            |:||:.          |.::::...::   ::.:::..:|..|..|:..|.:|..|: .:|...|
  Fly    87 PVKRKHHVCSQCSKEFGGKTDLQRHML---IHSDERPHKCKDCGKSYRQAVNLKNHITTAHEHRK 148

  Fly   281 PFQCSICQKTFTHIGSLNTHIRIHSGEKPYKCELCPKAFTQSSSLMVHMRSHSVRKPHQ--CVQC 343
            .|.||.|.|:|.....|..|:|:|||||||.|:||.|.|.:...|..||.||......|  |.:|
  Fly   149 QFVCSQCPKSFALKERLRLHMRLHSGEKPYPCDLCDKKFARGGQLQQHMVSHHKTSIQQFNCTKC 213

  Fly   344 DKGFINYSSLLLHQKTHIAPTETFICPECEREFKAEALLDEHMRMHTQELV-YQCAICREAFRAS 407
            ...|...::|.:|.:.|....| ..|..||.:|..|..|..|:.....:|. ::|.||.:.....
  Fly   214 SASFSTNANLRVHMERHEQGME-HRCSICENQFANELALRAHINQEHHKLTQFECEICHKMIEPD 277

  Fly   408 SELVQHMKNHMGEKPFTCSLCDRSFTQSGSLNIHMRIHTGEKPFQCKLCDKCFTQASSLSVHMKI 472
            .:|..||:.|...|...|.:|:..|||....|:|||:||||:|:||::|.:.|..:|.|.:|::.
  Fly   278 EDLATHMQRHTAVKTHVCEVCNTYFTQKSQYNVHMRMHTGERPYQCRICHQTFAHSSVLKLHIRK 342

  Fly   473 HAGEKPYPCPICGK--SYSQQAYLNKHIQAHQMASAASASTSPGLLVAKQPHETLVCIVCGSLHA 535
            |.||||:.|.:|..  ::||.|:|..|::.                :.|| .:..:|..|.....
  Fly   343 HTGEKPFRCQLCEDEVAFSQLAHLKNHMKK----------------IHKQ-QKPYMCEGCHDFFK 390

  Fly   536 DATALASHVHSQHAAL--LDTMKQSGMNTAPGGAIPDV----------KCSAEE-------QQAY 581
            ....|.|||  :|.|.  :|..|.|| |.:....|..|          |.|:.:       ::..
  Fly   391 IKVELQSHV--EHCAKCPVDGDKPSG-NQSEDAQILSVLRFNMAVVLKKISSAQKLRQLGYEKRL 452

  Fly   582 VERVQCVLQQMNHQQQHQQHQQQP 605
            ::.|.....::..:|.|......|
  Fly   453 IDNVIIASLKLAQRQSHDDATMTP 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12299NP_609448.1 COG5048 245..>501 CDD:227381 91/261 (35%)
C2H2 Zn finger 256..276 CDD:275368 6/20 (30%)
C2H2 Zn finger 284..304 CDD:275368 8/19 (42%)
zf-H2C2_2 296..321 CDD:463886 15/24 (63%)
C2H2 Zn finger 312..332 CDD:275368 8/19 (42%)
C2H2 Zn finger 340..360 CDD:275368 5/19 (26%)
C2H2 Zn finger 369..389 CDD:275368 7/19 (37%)
C2H2 Zn finger 397..417 CDD:275368 6/19 (32%)
zf-H2C2_2 409..434 CDD:463886 8/24 (33%)
C2H2 Zn finger 425..445 CDD:275368 9/19 (47%)
zf-H2C2_2 437..462 CDD:463886 13/24 (54%)
C2H2 Zn finger 453..473 CDD:275368 6/19 (32%)
C2H2 Zn finger 481..501 CDD:275368 7/21 (33%)
CG11247NP_649351.2 COG5048 <88..247 CDD:227381 49/162 (30%)
C2H2 Zn finger 95..115 CDD:275368 1/22 (5%)
C2H2 Zn finger 123..144 CDD:275368 6/20 (30%)
C2H2 Zn finger 152..172 CDD:275368 8/19 (42%)
C2H2 Zn finger 180..200 CDD:275368 8/19 (42%)
COG5048 <192..369 CDD:227381 61/177 (34%)
C2H2 Zn finger 210..230 CDD:275370 5/19 (26%)
C2H2 Zn finger 238..260 CDD:275371 7/21 (33%)
C2H2 Zn finger 267..287 CDD:275368 6/19 (32%)
C2H2 Zn finger 295..315 CDD:275368 9/19 (47%)
C2H2 Zn finger 323..343 CDD:275368 6/19 (32%)
C2H2 Zn finger 351..374 CDD:275368 7/38 (18%)
C2H2 Zn finger 382..399 CDD:275368 4/16 (25%)

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