DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12299 and Neu2

DIOPT Version :10

Sequence 1:NP_609448.1 Gene:CG12299 / 34483 FlyBaseID:FBgn0032295 Length:736 Species:Drosophila melanogaster
Sequence 2:NP_649316.1 Gene:Neu2 / 40375 FlyBaseID:FBgn0037085 Length:382 Species:Drosophila melanogaster


Alignment Length:294 Identity:93/294 - (31%)
Similarity:143/294 - (48%) Gaps:45/294 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   239 GAPVMDPALNGNQ----KC---------FQCTHCEASFPNAGDLSKHVRSHITNKPFQCSICQKT 290
            ||..:|   :||:    :|         |.|:||..||....:|..|:|||...:||.||:|.|:
  Fly    94 GADDVD---SGNEPDINECDIKAKEKPGFSCSHCPKSFQVKSNLKVHMRSHTGERPFTCSLCPKS 155

  Fly   291 FTHIGSLNTHIRIHSGEKPYKCELCPKAFTQSSSLMVHMRSHSVRKPHQCVQCDKGFINYSSLLL 355
            |.:...|..|:|.|:||:|::|..||::||....|..|::.|..|...:|..|.|.|:....|..
  Fly   156 FGYSSGLQNHMRTHTGERPFQCSHCPRSFTAGHHLKAHIQMHERRGSLRCPYCQKCFLTSLILKQ 220

  Fly   356 HQKTHIAPTETFICPECEREFKAEALLDEHMRMHTQELVYQCAICREAFRASSELVQHMKNH--- 417
            |..||...|: |.|.:|.:.|:.|..|..|||:| ||.::.|..|.:.|...:.|.:|:..:   
  Fly   221 HLATHTDETQ-FKCSQCSKSFQVEHELWMHMRVH-QERLFTCGHCSKDFALHAYLKRHLSRNARC 283

  Fly   418 -----------MG-EKPFTCSLCDRSFTQSGSLNIHMRIHTGEKPF---QCKLCDKCFTQASSLS 467
                       :| .|...|..|.::||...:|:.|::.||..||.   .||         ||.|
  Fly   284 SQSSKASAHKTLGHSKALKCGKCPKTFTDRSALSTHLKSHTKNKPLLEGPCK---------SSGS 339

  Fly   468 VHMKIHAGEKPYPCPICGKSYSQQAYLNKHIQAH 501
            .....:|..||:.|..|.:::|:::.|..|:|.|
  Fly   340 KPAHSNAQRKPFKCSSCPRTFSRKSALLTHLQTH 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12299NP_609448.1 COG5048 245..>501 CDD:227381 89/286 (31%)
C2H2 Zn finger 256..276 CDD:275368 8/19 (42%)
C2H2 Zn finger 284..304 CDD:275368 8/19 (42%)
zf-H2C2_2 296..321 CDD:463886 11/24 (46%)
C2H2 Zn finger 312..332 CDD:275368 7/19 (37%)
C2H2 Zn finger 340..360 CDD:275368 6/19 (32%)
C2H2 Zn finger 369..389 CDD:275368 8/19 (42%)
C2H2 Zn finger 397..417 CDD:275368 5/19 (26%)
zf-H2C2_2 409..434 CDD:463886 7/39 (18%)
C2H2 Zn finger 425..445 CDD:275368 6/19 (32%)
zf-H2C2_2 437..462 CDD:463886 8/27 (30%)
C2H2 Zn finger 453..473 CDD:275368 5/19 (26%)
C2H2 Zn finger 481..501 CDD:275368 6/19 (32%)
Neu2NP_649316.1 zf-AD 1..63 CDD:462262
COG5048 <119..241 CDD:227381 46/122 (38%)
C2H2 Zn finger 121..141 CDD:275368 8/19 (42%)
zf-H2C2_2 133..156 CDD:463886 11/22 (50%)
C2H2 Zn finger 149..169 CDD:275368 8/19 (42%)
zf-H2C2_2 162..185 CDD:463886 10/22 (45%)
C2H2 Zn finger 177..197 CDD:275368 7/19 (37%)
C2H2 Zn finger 205..225 CDD:275368 6/19 (32%)
zf-C2H2_8 206..286 CDD:464935 25/81 (31%)
C2H2 Zn finger 233..253 CDD:275368 8/19 (42%)
C2H2 Zn finger 260..297 CDD:275368 5/36 (14%)
C2H2 Zn finger 303..323 CDD:275368 6/19 (32%)
C2H2 Zn finger 353..373 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.

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