DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12299 and Phs

DIOPT Version :10

Sequence 1:NP_609448.1 Gene:CG12299 / 34483 FlyBaseID:FBgn0032295 Length:736 Species:Drosophila melanogaster
Sequence 2:NP_648789.3 Gene:Phs / 39697 FlyBaseID:FBgn0036522 Length:971 Species:Drosophila melanogaster


Alignment Length:812 Identity:168/812 - (20%)
Similarity:278/812 - (34%) Gaps:274/812 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 LPQQAP-NPPQQQPQQPQPP--------DLT----FHCMCCAEFF-------VHPLALYQHMNTL 70
            ||..|| .||.:|..:..||        |||    ...:..||..       |:.:.:...|   
  Fly   291 LPIPAPETPPPEQDGKEAPPSNASNDKEDLTMINDMVAVIAAERVKKTSSSKVNKMIIKLPM--- 352

  Fly    71 HPHEPGNGQQEQESPGDE---------------SEDYSWIFEPV-----CELAEDGSDSSD---- 111
             |.:.|..:.:.||..||               .|....:.||:     ...||:|:..|:    
  Fly   353 -PKKRGRKRTKPESLRDEQDNAEKTDKKKKLNKEEGQQPVLEPLQAKKTSNQAENGATQSNNVVK 416

  Fly   112 ------GSASSGSDSSSSSD------DDDDDDDDDSSSSSSSSSNSSSSSSSVPTTSNSNTQQSQ 164
                  ||...|:.|:..|:      ::.:.:..|::.|.:..........::.....:.||:..
  Fly   417 VQQNAKGSKKDGTQSAQKSETNPKHLENAETNSKDNTESVALKETIHDKQLTIDEAGKAGTQKDD 481

  Fly   165 ESVQPLHGLVAGPGYNEFQLQMTDPRESTS-----IFMVQPTVSVTPLQQLL------------- 211
            .|             |:.||..::.....|     :....|..|....||:.             
  Fly   482 NS-------------NQKQLDKSEANAGKSKMVDQVHQQMPVESAKDHQQMTEEPTNSTKRKRGR 533

  Fly   212 ----PPAPTVSPGLG---LQSTP-IKRRRGRRSNIGAPVMDPALNGNQKCFQCTHCEASFPNAGD 268
                .|.|.:.| ||   ::..| :..||.|:|......:....:..:...:....|....::..
  Fly   534 KERKSPTPVLIP-LGDKEIKEEPELPERRMRKSRQHVDYVVEIKDEEEDDDEVEEAEVDDDSSAT 597

  Fly   269 LSKHVRSHITNKPF--------------------QCSICQKTFTHIGSLNTHIRIHSGEKPYKCE 313
            :|.|..|  |::.|                    .|:.|.|||.....:..|:|:|:|||||.|.
  Fly   598 ISPHNSS--TDESFTSIKRESSEESQHNGIGGIHTCNFCGKTFKRFSRMQDHLRLHTGEKPYVCG 660

  Fly   314 LCPKAFTQSSSLMVHMRSHSVRKPHQCVQCDKGFINYSSLLLHQKTHIAPTETFICPECEREFKA 378
            .|.:||.....|:.|...|...|.::|..|.........|.|                       
  Fly   661 QCGRAFRLKMRLVEHQLRHRAEKAYKCDICSMPLATKQDLSL----------------------- 702

  Fly   379 EALLDEHMRMHTQELVYQCAICREAFRASSELVQHMKNHMGEKPFTCSLCDRSFTQSGSLNIHMR 443
                  |||.|..:..|:|..|.:.|..||:|..|::.|.||||::|.||.::|....:|.:|.|
  Fly   703 ------HMRHHKNDRRYKCDKCNKGFVRSSDLSIHVRIHTGEKPYSCDLCGKAFRARQNLVVHRR 761

  Fly   444 IHTGEKPFQCKLCDKCFTQASSLSVHMKIHAGEKPYPCPICGKSYSQQAYLNKHIQAHQMASAAS 508
            .|.|:||.||:||||.|.:...:.|||:.|.|||||.|..|.:.||.:..|.:|.:         
  Fly   762 THLGDKPIQCELCDKRFARKIDMRVHMRRHTGEKPYNCDACQRGYSSRVNLLRHQE--------- 817

  Fly   509 ASTSPGLLVAKQPHETLVCIVCGSLHADATALASHVHSQHAALLDTMKQSGM-NTAPGGAIPDVK 572
                                                           ::.|: ...||....|.|
  Fly   818 -----------------------------------------------REHGIEEQVPGSGQADKK 835

  Fly   573 CSAEEQQAYVERVQCVLQQMNHQQQHQQHQQQPPQQQQQHPQQQQQQHLQQQ---------PHQM 628
                                 |.:...:::|:...:.:..|::.:::.|||:         ..:.
  Fly   836 ---------------------HTKTATENEQENEPKAKAAPRRPRREKLQQKIAAQEKLLNDLKR 879

  Fly   629 QLPQQPKLP------AMDSTGED------------------EEEPDEAEEPPDEEEEQDEPEEPA 669
            .|...|::|      .:|.:|:|                  :.||    .|..|::|:..||:..
  Fly   880 SLSAMPEIPEESAQVKLDGSGQDIPADAGAGHAQVQVTLSMQMEP----APNTEDDEEITPEKEN 940

  Fly   670 EVKTEVLAAEDALTNPG------YPILGLQEE 695
            .:.:.:.|  |..|...      :.::|.|.|
  Fly   941 ALSSSMTA--DGKTKANRKITSYFTVVGQQAE 970

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12299NP_609448.1 COG5048 245..>501 CDD:227381 81/275 (29%)
C2H2 Zn finger 256..276 CDD:275368 3/19 (16%)
C2H2 Zn finger 284..304 CDD:275368 7/19 (37%)
zf-H2C2_2 296..321 CDD:463886 12/24 (50%)
C2H2 Zn finger 312..332 CDD:275368 6/19 (32%)
C2H2 Zn finger 340..360 CDD:275368 4/19 (21%)
C2H2 Zn finger 369..389 CDD:275368 3/19 (16%)
C2H2 Zn finger 397..417 CDD:275368 7/19 (37%)
zf-H2C2_2 409..434 CDD:463886 11/24 (46%)
C2H2 Zn finger 425..445 CDD:275368 7/19 (37%)
zf-H2C2_2 437..462 CDD:463886 14/24 (58%)
C2H2 Zn finger 453..473 CDD:275368 9/19 (47%)
C2H2 Zn finger 481..501 CDD:275368 6/19 (32%)
PhsNP_648789.3 COG5048 <594..787 CDD:227381 65/223 (29%)
C2H2 Zn finger 631..651 CDD:275368 7/19 (37%)
C2H2 Zn finger 715..735 CDD:275368 7/19 (37%)
C2H2 Zn finger 743..763 CDD:275368 7/19 (37%)
C2H2 Zn finger 771..791 CDD:275368 9/19 (47%)
zf-H2C2_2 783..808 CDD:463886 12/24 (50%)
C2H2 Zn finger 799..816 CDD:275370 5/16 (31%)

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