DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12299 and zbtb2a

DIOPT Version :9

Sequence 1:NP_609448.1 Gene:CG12299 / 34483 FlyBaseID:FBgn0032295 Length:736 Species:Drosophila melanogaster
Sequence 2:XP_005158656.1 Gene:zbtb2a / 393129 ZFINID:ZDB-GENE-040426-726 Length:453 Species:Danio rerio


Alignment Length:248 Identity:56/248 - (22%)
Similarity:84/248 - (33%) Gaps:61/248 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   302 RIHSGEKPYKCELCPKAFTQSSSLMVHMRSHSVRKPHQCVQCDKGFINYSSLLLHQKTHIAPTET 366
            |..|..|.|.|..|...|.|...|..|::.|:    :|..:              .:....|...
Zfish   201 RSASSRKHYTCNYCGVRFNQRCKLKEHLQVHT----NQATE--------------PQVSATPNGH 247

  Fly   367 FICPECEREFKAEALLDEHMRMHTQELVYQCAICREAFRASSELVQ-------HMKNHMGEKPFT 424
            .|..||:...:.....|..:...|.:..:.     |....|||:..       .|...|..:.|.
Zfish   248 NIDLECQDMEEDHLHADSDVISDTDQHAWM-----EDTPPSSEIADIDNLDGTEMGREMKRRKFE 307

  Fly   425 CSLCDRSFTQSGSLNIHMRIHTGEKPFQCKLCDKCFTQASSLSVHMKI----------------- 472
            |..|.|.|.|......||.|||| ||::|..|.|.|.:|:..:.|:.:                 
Zfish   308 CPTCARKFIQKSHWREHMYIHTG-KPYKCSACGKNFCRANQAARHVCLSQDADSYIMVNKQSLVL 371

  Fly   473 -------------HAGEKPYPCPICGKSYSQQAYLNKHIQAHQMASAASASTS 512
                         ...|:||.|.:|...::..:.:.||....:..:||||..|
Zfish   372 CGGEDNSQVEALFQTSERPYKCSMCATPFASPSEVPKHQCLTENKAAASAEYS 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12299NP_609448.1 COG5048 <254..413 CDD:227381 22/117 (19%)
C2H2 Zn finger 256..276 CDD:275368
zf-H2C2_2 268..293 CDD:290200
C2H2 Zn finger 284..304 CDD:275368 1/1 (100%)
zf-H2C2_2 296..321 CDD:290200 7/18 (39%)
zf-C2H2_2 312..>387 CDD:289522 13/74 (18%)
C2H2 Zn finger 312..332 CDD:275368 6/19 (32%)
C2H2 Zn finger 340..360 CDD:275368 0/19 (0%)
C2H2 Zn finger 369..389 CDD:275368 3/19 (16%)
C2H2 Zn finger 397..417 CDD:275368 5/26 (19%)
zf-H2C2_2 409..434 CDD:290200 8/31 (26%)
C2H2 Zn finger 425..445 CDD:275368 7/19 (37%)
zf-H2C2_2 437..462 CDD:290200 12/24 (50%)
C2H2 Zn finger 453..473 CDD:275368 6/49 (12%)
zf-H2C2_2 465..490 CDD:290200 6/54 (11%)
C2H2 Zn finger 481..501 CDD:275368 4/19 (21%)
zbtb2aXP_005158656.1 BTB 14..>93 CDD:279045
BTB 25..118 CDD:197585
C2H2 Zn finger 211..231 CDD:275368 6/19 (32%)
C2H2 Zn finger 308..328 CDD:275368 7/19 (37%)
zf-H2C2_2 320..342 CDD:290200 11/22 (50%)
C2H2 Zn finger 335..352 CDD:275368 5/16 (31%)
C2H2 Zn finger 393..410 CDD:275368 3/16 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.