DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12299 and fezf-1

DIOPT Version :9

Sequence 1:NP_609448.1 Gene:CG12299 / 34483 FlyBaseID:FBgn0032295 Length:736 Species:Drosophila melanogaster
Sequence 2:NP_502594.2 Gene:fezf-1 / 3564888 WormBaseID:WBGene00012639 Length:218 Species:Caenorhabditis elegans


Alignment Length:226 Identity:65/226 - (28%)
Similarity:95/226 - (42%) Gaps:57/226 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   278 TNKPFQCSICQKTFTHIGSLNTHIRIHSGEKPYKCELCPKAFTQSSSLMVHMRSHSVRKPHQCVQ 342
            :.|.|.|.||.|.|....:|..|:.:|:||:|:.|::|.|||.|:|:|..|...|:..|||:|..
 Worm    48 SRKKFPCEICGKQFNAHYNLTRHMPVHTGERPFVCKVCGKAFRQASTLCRHKIIHTDSKPHKCKT 112

  Fly   343 CDKGFINYSSLLLHQKTHIAPTETFICPECEREFKAEALLDEHMRMHTQELVYQCAICREAFRAS 407
            |.|                                                         .|..|
 Worm   113 CGK---------------------------------------------------------CFNRS 120

  Fly   408 SELVQHMKNHMGEKPFTCSLCDRSFTQSGSLNIHMRIHTGEKPFQCKLCDKCFTQASSLSVHMKI 472
            |.|..|::.|.|.|||.|.:|.:.|.|:|:...|...|...|.|.|.:|.:.|.|:.:|:.||..
 Worm   121 STLNTHVRIHQGFKPFVCEICGKGFHQNGNYKNHRLTHEDTKKFSCSICSRAFHQSYNLAFHMFT 185

  Fly   473 HAGEKPYPCPICGKSYSQQAYLNKHIQAHQM 503
            |...||:.|.:|.|.:.:...|.||::...|
 Worm   186 HEEHKPFTCHVCSKGFCRNFDLKKHLRKMHM 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12299NP_609448.1 COG5048 <254..413 CDD:227381 33/134 (25%)
C2H2 Zn finger 256..276 CDD:275368
zf-H2C2_2 268..293 CDD:290200 7/14 (50%)
C2H2 Zn finger 284..304 CDD:275368 7/19 (37%)
zf-H2C2_2 296..321 CDD:290200 11/24 (46%)
zf-C2H2_2 312..>387 CDD:289522 16/74 (22%)
C2H2 Zn finger 312..332 CDD:275368 9/19 (47%)
C2H2 Zn finger 340..360 CDD:275368 3/19 (16%)
C2H2 Zn finger 369..389 CDD:275368 0/19 (0%)
C2H2 Zn finger 397..417 CDD:275368 5/19 (26%)
zf-H2C2_2 409..434 CDD:290200 10/24 (42%)
C2H2 Zn finger 425..445 CDD:275368 6/19 (32%)
zf-H2C2_2 437..462 CDD:290200 7/24 (29%)
C2H2 Zn finger 453..473 CDD:275368 7/19 (37%)
zf-H2C2_2 465..490 CDD:290200 9/24 (38%)
C2H2 Zn finger 481..501 CDD:275368 6/19 (32%)
fezf-1NP_502594.2 COG5048 <13..212 CDD:227381 64/220 (29%)
DUF3449 <50..>70 CDD:288759 8/19 (42%)
C2H2 Zn finger 54..74 CDD:275368 7/19 (37%)
zf-H2C2_2 66..91 CDD:290200 11/24 (46%)
C2H2 Zn finger 82..102 CDD:275368 9/19 (47%)
C2H2 Zn finger 110..130 CDD:275368 8/76 (11%)
C2H2 Zn finger 138..158 CDD:275368 6/19 (32%)
C2H2 Zn finger 166..186 CDD:275368 7/19 (37%)
C2H2 Zn finger 194..212 CDD:275368 6/17 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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