DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12299 and wor

DIOPT Version :10

Sequence 1:NP_609448.1 Gene:CG12299 / 34483 FlyBaseID:FBgn0032295 Length:736 Species:Drosophila melanogaster
Sequence 2:NP_476601.1 Gene:wor / 34906 FlyBaseID:FBgn0001983 Length:548 Species:Drosophila melanogaster


Alignment Length:545 Identity:117/545 - (21%)
Similarity:177/545 - (32%) Gaps:198/545 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 QQSQESVQPLHGLVAGPGYNEFQLQ-MTDPRESTSIFMVQPTVSVTPLQQLL--PPAPTVSPGLG 222
            :.|.|...||.      .||...|: :.:..:...:..::..:...|..||.  ||.|...|   
  Fly   150 EPSDEEQFPLR------NYNNNLLKSIAEYEDCMKMQNIKEEIPPIPSPQLFYPPPTPLAEP--- 205

  Fly   223 LQSTPIKRRRGRRSNIGAPVMDPALNGNQKCFQCTHCEASF-PNAGDLSKHVRSHITNK------ 280
             :...:.:||....|:....:..||...|      |..... |...|:.:...:...|:      
  Fly   206 -EDLSVTQRRVLSENMNLQNVARALLSMQ------HMAPQHAPPPIDMEEDQENQDINQLKIKSS 263

  Fly   281 ---PFQCSICQKTFTHIGSLNTHIRIHSGEK-PYK---------------CELCPKAFTQSSSLM 326
               .:||..|.|.:.....|..|.:.|:.|. .||               .|.|    |..:|.:
  Fly   264 NDLYYQCQQCNKCYATYAGLVKHQQTHAYESTEYKIIRSQPGGSGAIVDQTEFC----TDQASAL 324

  Fly   327 VH----MRSHSVRKP-----HQCVQCDKGFINYSSLLLHQKTHIAPTE------TFICPECEREF 376
            :.    ..:.|::||     :.|..|.|.:..||.|..||:.|....|      .|.|..|::.:
  Fly   325 IQAANVASAQSMQKPVGVPRYHCQDCGKSYSTYSGLSKHQQFHCPSAEGNQVKKVFSCKNCDKTY 389

  Fly   377 KAEALLDEHMRMHTQELVYQCAICREAFRASSELVQHMKNHMGEKPFTCSLCDRSFTQSGSLNIH 441
            .:...|..|:|.||                              .|..|.:|.::|::...|..|
  Fly   390 VSLGALKMHIRTHT------------------------------LPCKCPICGKAFSRPWLLQGH 424

  Fly   442 MRIHTGEKPFQCKLCDKCFTQASSLSVHMKIHAGEKPYPCPICGKSYSQQAYLNKHIQAHQMASA 506
            :|.|||||||.|:.|::.|...|:|..||:.|:..|.|.||.|.||:|:.:.|.||:|:.     
  Fly   425 IRTHTGEKPFSCQHCNRAFADRSNLRAHMQTHSDVKKYSCPTCTKSFSRMSLLAKHLQSG----- 484

  Fly   507 ASASTSPGLLVAKQPHETLVCIVCGSLHADATALASHVHSQHAALLDTMKQSGMNTAPGGAIPDV 571
                                   |.:                       :|||..:..||..   
  Fly   485 -----------------------CQT-----------------------EQSGGPSGSGGGF--- 500

  Fly   572 KCSAEEQQAYVERVQCVLQQMNHQQQHQQHQQQPPQQQQQHPQQQQQQHLQ-----QQPHQMQLP 631
                                                     .|||.|||||     ..|||:...
  Fly   501 -----------------------------------------DQQQLQQHLQVYEEGHNPHQLYYA 524

  Fly   632 QQPKLPAMDSTGEDEEEPDEAEEPP 656
            ..    ...|.||:||..:...:||
  Fly   525 GS----VGSSNGEEEEGGEYQMQPP 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12299NP_609448.1 COG5048 245..>501 CDD:227381 76/296 (26%)
C2H2 Zn finger 256..276 CDD:275368 3/20 (15%)
C2H2 Zn finger 284..304 CDD:275368 5/19 (26%)
zf-H2C2_2 296..321 CDD:463886 8/40 (20%)
C2H2 Zn finger 312..332 CDD:275368 4/23 (17%)
C2H2 Zn finger 340..360 CDD:275368 8/19 (42%)
C2H2 Zn finger 369..389 CDD:275368 5/19 (26%)
C2H2 Zn finger 397..417 CDD:275368 0/19 (0%)
zf-H2C2_2 409..434 CDD:463886 4/24 (17%)
C2H2 Zn finger 425..445 CDD:275368 6/19 (32%)
zf-H2C2_2 437..462 CDD:463886 13/24 (54%)
C2H2 Zn finger 453..473 CDD:275368 7/19 (37%)
C2H2 Zn finger 481..501 CDD:275368 10/19 (53%)
worNP_476601.1 C2H2 Zn finger 270..290 CDD:275368 5/19 (26%)
C2H2 Zn finger 317..334 CDD:275368 3/20 (15%)
zf-C2H2 345..367 CDD:395048 8/21 (38%)
C2H2 Zn finger 347..367 CDD:275368 8/19 (42%)
zf-C2H2 380..402 CDD:395048 6/21 (29%)
C2H2 Zn finger 382..402 CDD:275368 5/19 (26%)
zf-C2H2 406..428 CDD:395048 6/21 (29%)
C2H2 Zn finger 408..428 CDD:275368 6/19 (32%)
zf-C2H2 434..456 CDD:395048 8/21 (38%)
C2H2 Zn finger 436..456 CDD:275368 7/19 (37%)
C2H2 Zn finger 464..481 CDD:275368 8/16 (50%)

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