DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12299 and ZNF260

DIOPT Version :10

Sequence 1:NP_609448.1 Gene:CG12299 / 34483 FlyBaseID:FBgn0032295 Length:736 Species:Drosophila melanogaster
Sequence 2:NP_001012774.1 Gene:ZNF260 / 339324 HGNCID:13499 Length:412 Species:Homo sapiens


Alignment Length:255 Identity:112/255 - (43%)
Similarity:160/255 - (62%) Gaps:1/255 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   247 LNGNQKCFQCTHCEASFPNAGDLSKHVRSHITNKPFQCSICQKTFTHIGSLNTHIRIHSGEKPYK 311
            ::..:|.|:|..|..:|.....|.||...|...|||:||.|.|.|:...:|..|.|||:|||||:
Human   157 IHTGEKPFECNQCGRAFSQKQYLIKHQNIHTGKKPFKCSECGKAFSQKENLIIHQRIHTGEKPYE 221

  Fly   312 CELCPKAFTQSSSLMVHMRSHSVRKPHQCVQCDKGFINYSSLLLHQKTHIAPTETFICPECEREF 376
            |:.|.|||.|.|||:.|.|||:..||:.|.:|.|.|...|:|..|:|.||. .:.:.|.||...|
Human   222 CKGCGKAFIQKSSLIRHQRSHTGEKPYTCKECGKAFSGKSNLTEHEKIHIG-EKPYKCNECGTIF 285

  Fly   377 KAEALLDEHMRMHTQELVYQCAICREAFRASSELVQHMKNHMGEKPFTCSLCDRSFTQSGSLNIH 441
            :.:..|.:|..:||.|..|:|..|.:||...:.|:.|::.|.|:||:.|.:|.::|.||.||.:|
Human   286 RQKQYLIKHHNIHTGEKPYECNKCGKAFSRITSLIVHVRIHTGDKPYECKVCGKAFCQSSSLTVH 350

  Fly   442 MRIHTGEKPFQCKLCDKCFTQASSLSVHMKIHAGEKPYPCPICGKSYSQQAYLNKHIQAH 501
            ||.||||||:.|..|.|.|:|.|:|::||:||.|||||.|..|||::||:::..:|.:.|
Human   351 MRSHTGEKPYGCNECGKAFSQFSTLALHMRIHTGEKPYQCSECGKAFSQKSHHIRHQRIH 410

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG12299NP_609448.1 COG5048 245..>501 CDD:227381 111/253 (44%)
C2H2 Zn finger 256..276 CDD:275368 6/19 (32%)
C2H2 Zn finger 284..304 CDD:275368 8/19 (42%)
zf-H2C2_2 296..321 CDD:463886 15/24 (63%)
C2H2 Zn finger 312..332 CDD:275368 11/19 (58%)
C2H2 Zn finger 340..360 CDD:275368 8/19 (42%)
C2H2 Zn finger 369..389 CDD:275368 6/19 (32%)
C2H2 Zn finger 397..417 CDD:275368 6/19 (32%)
zf-H2C2_2 409..434 CDD:463886 9/24 (38%)
C2H2 Zn finger 425..445 CDD:275368 10/19 (53%)
zf-H2C2_2 437..462 CDD:463886 15/24 (63%)
C2H2 Zn finger 453..473 CDD:275368 9/19 (47%)
C2H2 Zn finger 481..501 CDD:275368 7/19 (37%)
ZNF260NP_001012774.1 COG5048 25..406 CDD:227381 110/249 (44%)
C2H2 Zn finger 29..49 CDD:275368
C2H2 Zn finger 57..77 CDD:275368
C2H2 Zn finger 85..130 CDD:275368